Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.43■□□□□ 0.06
IRX4P78413 AC005077.2-201ENST00000449786 690 ntBASIC15.43■□□□□ 0.06
IRX4P78413 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 AC026410.3-201ENST00000514280 936 ntBASIC15.43■□□□□ 0.06
IRX4P78413 AP001582.1-201ENST00000525856 295 ntBASIC15.43■□□□□ 0.06
IRX4P78413 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
IRX4P78413 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.43■□□□□ 0.06
IRX4P78413 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.43■□□□□ 0.06
IRX4P78413 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
IRX4P78413 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
IRX4P78413 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.43■□□□□ 0.06
IRX4P78413 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.43■□□□□ 0.06
IRX4P78413 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.43■□□□□ 0.06
IRX4P78413 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.43■□□□□ 0.06
IRX4P78413 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 DRD5P1-201ENST00000456605 1438 ntBASIC15.43■□□□□ 0.06
IRX4P78413 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IRX4P78413 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.43■□□□□ 0.06
IRX4P78413 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
IRX4P78413 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 AC138028.6-201ENST00000616106 1482 ntBASIC15.42■□□□□ 0.06
IRX4P78413 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.42■□□□□ 0.06
IRX4P78413 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
IRX4P78413 RPL5P21-201ENST00000404620 815 ntBASIC15.42■□□□□ 0.06
IRX4P78413 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.42■□□□□ 0.06
IRX4P78413 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
IRX4P78413 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 AC000095.1-201ENST00000603208 874 ntBASIC15.42■□□□□ 0.06
IRX4P78413 AC093813.1-201ENST00000605066 256 ntBASIC15.42■□□□□ 0.06
IRX4P78413 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
IRX4P78413 AC005695.3-201ENST00000614522 232 ntBASIC15.42■□□□□ 0.06
IRX4P78413 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.42■□□□□ 0.06
IRX4P78413 AC138951.2-201ENST00000623455 1161 ntBASIC15.42■□□□□ 0.06
IRX4P78413 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.42■□□□□ 0.06
IRX4P78413 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
IRX4P78413 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.42■□□□□ 0.06
IRX4P78413 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
IRX4P78413 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
IRX4P78413 AHCYP2-201ENST00000430630 1300 ntBASIC15.42■□□□□ 0.06
IRX4P78413 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IRX4P78413 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.41■□□□□ 0.06
IRX4P78413 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
IRX4P78413 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.41■□□□□ 0.06
IRX4P78413 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IRX4P78413 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms