Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM4P67936 AC069120.2-201ENST00000524091 540 ntBASIC16.57■□□□□ 0.24
TPM4P67936 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.57■□□□□ 0.24
TPM4P67936 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.57■□□□□ 0.24
TPM4P67936 AC036164.1-201ENST00000570544 333 ntBASIC16.57■□□□□ 0.24
TPM4P67936 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
TPM4P67936 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
TPM4P67936 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM4P67936 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM4P67936 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM4P67936 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TPM4P67936 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TPM4P67936 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.57■□□□□ 0.24
TPM4P67936 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 TLE1P1-201ENST00000422965 589 ntBASIC16.56■□□□□ 0.24
TPM4P67936 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 AC026410.3-201ENST00000514280 936 ntBASIC16.56■□□□□ 0.24
TPM4P67936 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM4P67936 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.56■□□□□ 0.24
TPM4P67936 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM4P67936 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.56■□□□□ 0.24
TPM4P67936 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM4P67936 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM4P67936 BX539320.1-201ENST00000623759 877 ntBASIC16.56■□□□□ 0.24
TPM4P67936 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM4P67936 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM4P67936 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM4P67936 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM4P67936 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TPM4P67936 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM4P67936 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM4P67936 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 AL022342.1-201ENST00000400363 863 ntBASIC16.55■□□□□ 0.24
TPM4P67936 AC211486.1-202ENST00000416371 468 ntBASIC16.55■□□□□ 0.24
TPM4P67936 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM4P67936 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM4P67936 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM4P67936 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM4P67936 AC125807.1-201ENST00000483097 614 ntBASIC16.55■□□□□ 0.24
TPM4P67936 RPL13AP25-201ENST00000484130 612 ntBASIC16.55■□□□□ 0.24
TPM4P67936 AC211476.1-201ENST00000503899 468 ntBASIC16.55■□□□□ 0.24
TPM4P67936 AC022616.1-201ENST00000518688 554 ntBASIC16.55■□□□□ 0.24
TPM4P67936 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM4P67936 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM4P67936 AC093813.1-201ENST00000605066 256 ntBASIC16.55■□□□□ 0.24
TPM4P67936 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM4P67936 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM4P67936 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM4P67936 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM4P67936 CLK3P2-201ENST00000427566 1453 ntBASIC16.54■□□□□ 0.24
TPM4P67936 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.54■□□□□ 0.24
TPM4P67936 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms