Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RIPK4P57078 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RIPK4P57078 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RIPK4P57078 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIPK4P57078 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 AC139749.1-202ENST00000617529 3139 ntBASIC19.16■□□□□ 0.66
RIPK4P57078 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC19.16■□□□□ 0.66
RIPK4P57078 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.16■□□□□ 0.66
RIPK4P57078 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.16■□□□□ 0.66
RIPK4P57078 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.16■□□□□ 0.66
RIPK4P57078 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.16■□□□□ 0.66
RIPK4P57078 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 ACTG1P17-201ENST00000558391 1119 ntBASIC19.16■□□□□ 0.66
RIPK4P57078 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 AL132994.2-201ENST00000603120 687 ntBASIC19.16■□□□□ 0.66
RIPK4P57078 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.16■□□□□ 0.66
RIPK4P57078 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.16■□□□□ 0.66
RIPK4P57078 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 CICP4-201ENST00000447359 2812 ntBASIC19.16■□□□□ 0.66
RIPK4P57078 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC19.16■□□□□ 0.66
RIPK4P57078 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIPK4P57078 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RIPK4P57078 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.15■□□□□ 0.66
RIPK4P57078 AC011498.7-201ENST00000624986 2027 ntBASIC19.15■□□□□ 0.66
RIPK4P57078 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RIPK4P57078 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC19.15■□□□□ 0.66
RIPK4P57078 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.15■□□□□ 0.66
RIPK4P57078 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.15■□□□□ 0.66
RIPK4P57078 AC026740.1-201ENST00000607068 791 ntBASIC19.15■□□□□ 0.66
RIPK4P57078 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.15■□□□□ 0.66
RIPK4P57078 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.15■□□□□ 0.66
RIPK4P57078 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.15■□□□□ 0.66
RIPK4P57078 AC015802.1-201ENST00000588104 1449 ntBASIC19.15■□□□□ 0.66
RIPK4P57078 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIPK4P57078 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.14■□□□□ 0.66
RIPK4P57078 AC005912.2-201ENST00000619492 2400 ntBASIC19.14■□□□□ 0.66
RIPK4P57078 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RIPK4P57078 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
RIPK4P57078 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK4P57078 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
RIPK4P57078 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK4P57078 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK4P57078 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK4P57078 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK4P57078 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RIPK4P57078 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
RIPK4P57078 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.14■□□□□ 0.65
RIPK4P57078 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
RIPK4P57078 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RIPK4P57078 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
RIPK4P57078 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK4P57078 KRT18P36-201ENST00000411618 1276 ntBASIC19.14■□□□□ 0.65
RIPK4P57078 CALR4P-201ENST00000431943 946 ntBASIC19.14■□□□□ 0.65
RIPK4P57078 ST13P19-201ENST00000442505 1124 ntBASIC19.14■□□□□ 0.65
RIPK4P57078 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RIPK4P57078 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms