Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 KLF2P2-201ENST00000416807 1039 ntBASIC12.3□□□□□ -0.44
RIPPLY3P57055 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 VENTXP4-201ENST00000449029 958 ntBASIC12.3□□□□□ -0.44
RIPPLY3P57055 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 FBXO36P1-201ENST00000579006 471 ntBASIC12.3□□□□□ -0.44
RIPPLY3P57055 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 MIR6893-201ENST00000613458 69 ntBASIC12.3□□□□□ -0.44
RIPPLY3P57055 LINC01783-202ENST00000614408 828 ntBASIC12.3□□□□□ -0.44
RIPPLY3P57055 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 BX284668.2-205ENST00000619677 828 ntBASIC12.3□□□□□ -0.44
RIPPLY3P57055 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
RIPPLY3P57055 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RIPPLY3P57055 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 IL9RP3-201ENST00000442856 1674 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 AC092053.1-201ENST00000605787 1936 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 RNF216P1-203ENST00000404404 2427 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 AL121723.1-201ENST00000445194 1519 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 ACTG1P19-201ENST00000418987 1116 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 AC092580.1-201ENST00000433998 658 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 AL451000.1-201ENST00000451300 1186 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 MYL6-215ENST00000549566 685 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 AP006248.1-201ENST00000610471 67 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 MIR6769A-201ENST00000617340 73 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 MIEF1-215ENST00000637854 213 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 OR2I1P-210ENST00000642037 4691 ntBASIC12.29□□□□□ -0.44
RIPPLY3P57055 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RIPPLY3P57055 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.29□□□□□ -0.44
RIPPLY3P57055 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms