Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.15■□□□□ 0.02
ATXN3P54252 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ATXN3P54252 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.15■□□□□ 0.02
ATXN3P54252 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.15■□□□□ 0.02
ATXN3P54252 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.15■□□□□ 0.02
ATXN3P54252 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.15■□□□□ 0.02
ATXN3P54252 MAGEA5-201ENST00000446757 942 ntBASIC15.15■□□□□ 0.02
ATXN3P54252 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.15■□□□□ 0.02
ATXN3P54252 MIR3619-201ENST00000579667 83 ntBASIC15.15■□□□□ 0.02
ATXN3P54252 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.15■□□□□ 0.02
ATXN3P54252 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.15■□□□□ 0.02
ATXN3P54252 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ATXN3P54252 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.15■□□□□ 0.02
ATXN3P54252 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ATXN3P54252 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATXN3P54252 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ATXN3P54252 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 AC140479.7-201ENST00000636301 2332 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ATXN3P54252 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 TMEM198B-204ENST00000484016 896 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 RN7SL720P-201ENST00000488178 304 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.14■□□□□ 0.01
ATXN3P54252 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
ATXN3P54252 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 AC091812.3-201ENST00000621362 345 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 AC127383.1-201ENST00000444697 1800 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ATXN3P54252 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATXN3P54252 AC067750.1-201ENST00000608826 6545 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 KRT8P19-201ENST00000551916 1455 ntBASIC15.14■□□□□ 0.01
ATXN3P54252 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ATXN3P54252 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ATXN3P54252 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms