Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GTF2A1P52655 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
GTF2A1P52655 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
GTF2A1P52655 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
GTF2A1P52655 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
GTF2A1P52655 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.46□□□□□ -0.09
GTF2A1P52655 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC14.46□□□□□ -0.09
GTF2A1P52655 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.46□□□□□ -0.09
GTF2A1P52655 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.46□□□□□ -0.09
GTF2A1P52655 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
GTF2A1P52655 RBM17P3-201ENST00000417687 1192 ntBASIC14.46□□□□□ -0.09
GTF2A1P52655 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.46□□□□□ -0.09
GTF2A1P52655 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.46□□□□□ -0.09
GTF2A1P52655 AC022447.6-201ENST00000515522 438 ntBASIC14.46□□□□□ -0.09
GTF2A1P52655 SART3-203ENST00000546611 1184 ntBASIC14.46□□□□□ -0.09
GTF2A1P52655 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.46□□□□□ -0.09
GTF2A1P52655 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.46□□□□□ -0.09
GTF2A1P52655 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.46□□□□□ -0.09
GTF2A1P52655 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.46□□□□□ -0.09
GTF2A1P52655 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.46□□□□□ -0.09
GTF2A1P52655 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 CSPG4P13-202ENST00000567704 4801 ntBASIC14.46□□□□□ -0.09
GTF2A1P52655 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 AGAP10P-201ENST00000454844 2418 ntBASIC14.46□□□□□ -0.09
GTF2A1P52655 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GTF2A1P52655 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.46□□□□□ -0.09
GTF2A1P52655 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
GTF2A1P52655 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
GTF2A1P52655 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GTF2A1P52655 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GTF2A1P52655 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GTF2A1P52655 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
GTF2A1P52655 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GTF2A1P52655 PKP4P1-201ENST00000426801 2158 ntBASIC14.46□□□□□ -0.1
GTF2A1P52655 AGGF1P10-201ENST00000635005 2191 ntBASIC14.46□□□□□ -0.1
GTF2A1P52655 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GTF2A1P52655 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GTF2A1P52655 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 ELK2BP-201ENST00000415014 1224 ntBASIC14.45□□□□□ -0.1
GTF2A1P52655 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.45□□□□□ -0.1
GTF2A1P52655 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.45□□□□□ -0.1
GTF2A1P52655 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 AC005412.3-201ENST00000580309 715 ntBASIC14.45□□□□□ -0.1
GTF2A1P52655 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 AC012617.1-204ENST00000586340 2305 ntBASIC14.45□□□□□ -0.1
GTF2A1P52655 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.45□□□□□ -0.1
GTF2A1P52655 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 FLJ30679-201ENST00000624773 1980 ntBASIC14.45□□□□□ -0.1
GTF2A1P52655 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GTF2A1P52655 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GTF2A1P52655 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GTF2A1P52655 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
GTF2A1P52655 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms