Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GPC3P51654 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.19■□□□□ 0.18
GPC3P51654 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
GPC3P51654 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 AC144522.1-201ENST00000625111 1658 ntBASIC16.19■□□□□ 0.18
GPC3P51654 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.19■□□□□ 0.18
GPC3P51654 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC3P51654 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC3P51654 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.19■□□□□ 0.18
GPC3P51654 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC3P51654 IMP3P2-201ENST00000489760 475 ntBASIC16.19■□□□□ 0.18
GPC3P51654 AC006122.1-201ENST00000493323 440 ntBASIC16.19■□□□□ 0.18
GPC3P51654 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC3P51654 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
GPC3P51654 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.19■□□□□ 0.18
GPC3P51654 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GPC3P51654 RN7SL574P-201ENST00000581512 297 ntBASIC16.19■□□□□ 0.18
GPC3P51654 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.19■□□□□ 0.18
GPC3P51654 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.19■□□□□ 0.18
GPC3P51654 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 AL136379.1-201ENST00000623471 2642 ntBASIC16.19■□□□□ 0.18
GPC3P51654 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GPC3P51654 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GPC3P51654 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.19■□□□□ 0.18
GPC3P51654 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GPC3P51654 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 AL161772.1-201ENST00000610494 4412 ntBASIC16.18■□□□□ 0.18
GPC3P51654 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.18■□□□□ 0.18
GPC3P51654 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GPC3P51654 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
GPC3P51654 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
GPC3P51654 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 CYP4F23P-201ENST00000593402 1579 ntBASIC16.18■□□□□ 0.18
GPC3P51654 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GPC3P51654 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GPC3P51654 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.18■□□□□ 0.18
GPC3P51654 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 AL133466.1-201ENST00000447582 150 ntBASIC16.18■□□□□ 0.18
GPC3P51654 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.18■□□□□ 0.18
GPC3P51654 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.18■□□□□ 0.18
GPC3P51654 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.18■□□□□ 0.18
GPC3P51654 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.18■□□□□ 0.18
GPC3P51654 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.18■□□□□ 0.18
GPC3P51654 AL161670.2-201ENST00000557650 1227 ntBASIC16.18■□□□□ 0.18
GPC3P51654 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.18■□□□□ 0.18
GPC3P51654 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
GPC3P51654 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
GPC3P51654 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GPC3P51654 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
GPC3P51654 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
GPC3P51654 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
GPC3P51654 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GPC3P51654 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms