Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.91■□□□□ 0.14
BRCA2P51587 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.9■□□□□ 0.14
BRCA2P51587 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 DERL2-206ENST00000572834 589 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.9■□□□□ 0.14
BRCA2P51587 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 RN7SL767P-201ENST00000493013 295 ntBASIC15.9■□□□□ 0.14
BRCA2P51587 EEF1GP8-201ENST00000506566 1154 ntBASIC15.9■□□□□ 0.14
BRCA2P51587 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC011431.1-201ENST00000512971 230 ntBASIC15.9■□□□□ 0.14
BRCA2P51587 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 AL365181.3-201ENST00000605886 3222 ntBASIC15.9■□□□□ 0.14
BRCA2P51587 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 LINC02486-201ENST00000604157 3000 ntBASIC15.9■□□□□ 0.14
BRCA2P51587 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.9■□□□□ 0.14
BRCA2P51587 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BRCA2P51587 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC15.9■□□□□ 0.14
BRCA2P51587 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.9■□□□□ 0.14
BRCA2P51587 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.89■□□□□ 0.13
BRCA2P51587 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 AL773545.2-201ENST00000442149 472 ntBASIC15.89■□□□□ 0.13
BRCA2P51587 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 AC079414.2-201ENST00000567157 1104 ntBASIC15.89■□□□□ 0.13
BRCA2P51587 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC15.89■□□□□ 0.13
BRCA2P51587 KRT8P18-201ENST00000413425 1445 ntBASIC15.89■□□□□ 0.13
BRCA2P51587 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.89■□□□□ 0.13
BRCA2P51587 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 KRT18P62-201ENST00000446618 1287 ntBASIC15.89■□□□□ 0.13
BRCA2P51587 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
BRCA2P51587 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BRCA2P51587 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.89■□□□□ 0.13
BRCA2P51587 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCA2P51587 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCA2P51587 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
BRCA2P51587 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BRCA2P51587 MIR1226-201ENST00000408658 75 ntBASIC15.88■□□□□ 0.13
BRCA2P51587 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.88■□□□□ 0.13
BRCA2P51587 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.88■□□□□ 0.13
BRCA2P51587 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC15.88■□□□□ 0.13
BRCA2P51587 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BRCA2P51587 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCA2P51587 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BRCA2P51587 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.88■□□□□ 0.13
BRCA2P51587 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.88■□□□□ 0.13
BRCA2P51587 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCA2P51587 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.88■□□□□ 0.13
BRCA2P51587 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BRCA2P51587 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms