Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.86□□□□□ -0.19
GABRA4P48169 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 PDIA3P2-201ENST00000428073 158 ntBASIC13.86□□□□□ -0.19
GABRA4P48169 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 TPT1P11-201ENST00000458482 498 ntBASIC13.86□□□□□ -0.19
GABRA4P48169 AC012618.1-201ENST00000461223 412 ntBASIC13.86□□□□□ -0.19
GABRA4P48169 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 AC105129.2-201ENST00000559536 390 ntBASIC13.86□□□□□ -0.19
GABRA4P48169 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.86□□□□□ -0.19
GABRA4P48169 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 MEG3_2.1-201ENST00000611456 105 ntBASIC13.86□□□□□ -0.19
GABRA4P48169 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.86□□□□□ -0.19
GABRA4P48169 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.86□□□□□ -0.19
GABRA4P48169 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GABRA4P48169 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.85□□□□□ -0.19
GABRA4P48169 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC239868.1-201ENST00000369385 493 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 Z97180.1-201ENST00000445173 988 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 AC073150.1-201ENST00000450406 1084 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.85□□□□□ -0.19
GABRA4P48169 NUP210P1-202ENST00000504322 710 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.85□□□□□ -0.19
GABRA4P48169 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.85□□□□□ -0.19
GABRA4P48169 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC124068.2-201ENST00000569473 1109 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC106872.11-201ENST00000605838 421 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 MIR6074-201ENST00000612054 107 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 CU633904.3-201ENST00000624042 1029 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC113367.3-201ENST00000508316 1912 ntBASIC13.85□□□□□ -0.19
GABRA4P48169 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.85□□□□□ -0.19
GABRA4P48169 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.85□□□□□ -0.19
GABRA4P48169 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.85□□□□□ -0.19
GABRA4P48169 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GABRA4P48169 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms