Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AC090386.2-201ENST00000623010 1039 ntBASIC15.21■□□□□ 0.03
SCNN1AP37088 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SCNN1AP37088 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.21■□□□□ 0.03
SCNN1AP37088 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.21■□□□□ 0.02
SCNN1AP37088 FAM90A7P-201ENST00000382628 1395 ntBASIC15.21■□□□□ 0.02
SCNN1AP37088 FAM90A23P-201ENST00000400136 1395 ntBASIC15.21■□□□□ 0.02
SCNN1AP37088 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.21■□□□□ 0.02
SCNN1AP37088 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.21■□□□□ 0.02
SCNN1AP37088 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SCNN1AP37088 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SCNN1AP37088 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SCNN1AP37088 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SCNN1AP37088 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 MBLAC2-202ENST00000514906 1936 ntBASIC15.2■□□□□ 0.02
SCNN1AP37088 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SCNN1AP37088 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.2■□□□□ 0.02
SCNN1AP37088 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 XBP1P1-201ENST00000436573 652 ntBASIC15.2■□□□□ 0.02
SCNN1AP37088 RPL18P13-201ENST00000478088 569 ntBASIC15.2■□□□□ 0.02
SCNN1AP37088 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.2■□□□□ 0.02
SCNN1AP37088 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.2■□□□□ 0.02
SCNN1AP37088 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SCNN1AP37088 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.2■□□□□ 0.02
SCNN1AP37088 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.2■□□□□ 0.02
SCNN1AP37088 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.2■□□□□ 0.02
SCNN1AP37088 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.2■□□□□ 0.02
SCNN1AP37088 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SCNN1AP37088 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.2■□□□□ 0.02
SCNN1AP37088 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.2■□□□□ 0.02
SCNN1AP37088 AL008721.1-201ENST00000609964 604 ntBASIC15.2■□□□□ 0.02
SCNN1AP37088 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.2■□□□□ 0.02
SCNN1AP37088 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.2■□□□□ 0.02
SCNN1AP37088 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCNN1AP37088 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SCNN1AP37088 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.19■□□□□ 0.02
SCNN1AP37088 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 USP17L6P-201ENST00000382470 1197 ntBASIC15.19■□□□□ 0.02
SCNN1AP37088 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SCNN1AP37088 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.19■□□□□ 0.02
SCNN1AP37088 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.19■□□□□ 0.02
SCNN1AP37088 SCARNA21-201ENST00000517026 139 ntBASIC15.19■□□□□ 0.02
SCNN1AP37088 AC126915.1-201ENST00000522847 1038 ntBASIC15.19■□□□□ 0.02
SCNN1AP37088 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.19■□□□□ 0.02
SCNN1AP37088 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.19■□□□□ 0.02
SCNN1AP37088 RN7SL163P-201ENST00000583100 276 ntBASIC15.19■□□□□ 0.02
SCNN1AP37088 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 AL591471.1-201ENST00000621855 229 ntBASIC15.19■□□□□ 0.02
SCNN1AP37088 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.19■□□□□ 0.02
SCNN1AP37088 AC068587.8-201ENST00000641239 219 ntBASIC15.19■□□□□ 0.02
SCNN1AP37088 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms