Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FAM8A2P-201ENST00000528813 1142 ntBASIC14.6□□□□□ -0.07
HMGCLP35914 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 AC005730.2-201ENST00000564549 1184 ntBASIC14.6□□□□□ -0.07
HMGCLP35914 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.6□□□□□ -0.07
HMGCLP35914 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.6□□□□□ -0.07
HMGCLP35914 AC005695.3-201ENST00000614522 232 ntBASIC14.6□□□□□ -0.07
HMGCLP35914 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.6□□□□□ -0.07
HMGCLP35914 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.6□□□□□ -0.07
HMGCLP35914 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 AC064801.2-201ENST00000625052 1303 ntBASIC14.6□□□□□ -0.07
HMGCLP35914 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HMGCLP35914 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HMGCLP35914 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 OR2I1P-210ENST00000642037 4691 ntBASIC14.59□□□□□ -0.07
HMGCLP35914 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.59□□□□□ -0.07
HMGCLP35914 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGCLP35914 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HMGCLP35914 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.59□□□□□ -0.07
HMGCLP35914 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 MIR1908-201ENST00000410394 80 ntBASIC14.59□□□□□ -0.07
HMGCLP35914 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 AC021723.1-201ENST00000486306 515 ntBASIC14.59□□□□□ -0.07
HMGCLP35914 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 RBM8B-201ENST00000555532 525 ntBASIC14.59□□□□□ -0.07
HMGCLP35914 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.59□□□□□ -0.07
HMGCLP35914 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.59□□□□□ -0.07
HMGCLP35914 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HMGCLP35914 AC104982.3-201ENST00000581995 514 ntBASIC14.59□□□□□ -0.07
HMGCLP35914 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.59□□□□□ -0.07
HMGCLP35914 AP000346.4-201ENST00000614827 381 ntBASIC14.59□□□□□ -0.07
HMGCLP35914 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 AC152010.1-201ENST00000415779 2006 ntBASIC14.59□□□□□ -0.07
HMGCLP35914 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.59□□□□□ -0.07
HMGCLP35914 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HMGCLP35914 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.58□□□□□ -0.07
HMGCLP35914 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
HMGCLP35914 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
HMGCLP35914 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HMGCLP35914 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HMGCLP35914 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.58□□□□□ -0.07
HMGCLP35914 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.58□□□□□ -0.07
HMGCLP35914 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
HMGCLP35914 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCLP35914 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCLP35914 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 OR2I1P-209ENST00000641730 5365 ntBASIC14.58□□□□□ -0.08
HMGCLP35914 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGCLP35914 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HMGCLP35914 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCLP35914 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HMGCLP35914 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 AL161932.2-201ENST00000435436 679 ntBASIC14.58□□□□□ -0.08
HMGCLP35914 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGCLP35914 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCLP35914 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.58□□□□□ -0.08
HMGCLP35914 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.58□□□□□ -0.08
HMGCLP35914 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCLP35914 AC091271.1-201ENST00000611877 1162 ntBASIC14.58□□□□□ -0.08
HMGCLP35914 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.58□□□□□ -0.08
HMGCLP35914 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
HMGCLP35914 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMGCLP35914 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.58□□□□□ -0.08
HMGCLP35914 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms