Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LSP1P33241 AL391647.1-201ENST00000395664 511 ntBASIC14.8□□□□□ -0.04
LSP1P33241 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.8□□□□□ -0.04
LSP1P33241 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.8□□□□□ -0.04
LSP1P33241 RPL13AP23-201ENST00000480739 586 ntBASIC14.8□□□□□ -0.04
LSP1P33241 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.8□□□□□ -0.04
LSP1P33241 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.8□□□□□ -0.04
LSP1P33241 LINC01225-203ENST00000563550 1244 ntBASIC14.8□□□□□ -0.04
LSP1P33241 RARRES2P9-201ENST00000565168 469 ntBASIC14.8□□□□□ -0.04
LSP1P33241 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.8□□□□□ -0.04
LSP1P33241 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.8□□□□□ -0.04
LSP1P33241 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.8□□□□□ -0.04
LSP1P33241 AF228730.6-201ENST00000641497 218 ntBASIC14.8□□□□□ -0.04
LSP1P33241 AC084121.3-201ENST00000641716 218 ntBASIC14.8□□□□□ -0.04
LSP1P33241 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSP1P33241 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSP1P33241 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.8□□□□□ -0.04
LSP1P33241 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSP1P33241 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
LSP1P33241 LINC00567-201ENST00000569854 3409 ntBASIC14.8□□□□□ -0.04
LSP1P33241 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.8□□□□□ -0.04
LSP1P33241 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LSP1P33241 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.8□□□□□ -0.04
LSP1P33241 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.8□□□□□ -0.04
LSP1P33241 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSP1P33241 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LSP1P33241 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LSP1P33241 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LSP1P33241 AC005014.1-201ENST00000432006 2976 ntBASIC14.79□□□□□ -0.04
LSP1P33241 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
LSP1P33241 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
LSP1P33241 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LSP1P33241 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 AL022342.1-201ENST00000400363 863 ntBASIC14.79□□□□□ -0.04
LSP1P33241 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 AL671277.1-201ENST00000429656 993 ntBASIC14.79□□□□□ -0.04
LSP1P33241 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.79□□□□□ -0.04
LSP1P33241 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.79□□□□□ -0.04
LSP1P33241 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 AC009474.1-201ENST00000455096 1565 ntBASIC14.79□□□□□ -0.04
LSP1P33241 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.79□□□□□ -0.04
LSP1P33241 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.79□□□□□ -0.04
LSP1P33241 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.79□□□□□ -0.04
LSP1P33241 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.79□□□□□ -0.04
LSP1P33241 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.79□□□□□ -0.04
LSP1P33241 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.79□□□□□ -0.04
LSP1P33241 AC104109.2-201ENST00000602919 1418 ntBASIC14.79□□□□□ -0.04
LSP1P33241 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.79□□□□□ -0.04
LSP1P33241 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.79□□□□□ -0.04
LSP1P33241 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.79□□□□□ -0.04
LSP1P33241 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LSP1P33241 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LSP1P33241 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.78□□□□□ -0.04
LSP1P33241 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LSP1P33241 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.78□□□□□ -0.04
LSP1P33241 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 PCDHA5-203ENST00000614258 4248 ntBASIC14.78□□□□□ -0.04
LSP1P33241 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 KRT8P12-202ENST00000472924 1397 ntBASIC14.78□□□□□ -0.04
LSP1P33241 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 AC015819.3-201ENST00000624305 2674 ntBASIC14.78□□□□□ -0.04
LSP1P33241 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LSP1P33241 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LSP1P33241 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LSP1P33241 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms