Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.03■□□□□ -0
SLC6A4P31645 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.03■□□□□ -0
SLC6A4P31645 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 AC091544.8-201ENST00000619490 361 ntBASIC15.03■□□□□ -0
SLC6A4P31645 AC092299.1-201ENST00000632679 757 ntBASIC15.03■□□□□ -0
SLC6A4P31645 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC6A4P31645 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC6A4P31645 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A4P31645 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SLC6A4P31645 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC6A4P31645 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.02■□□□□ -0
SLC6A4P31645 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.02■□□□□ -0
SLC6A4P31645 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.02■□□□□ -0
SLC6A4P31645 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 RN7SL11P-201ENST00000471305 293 ntBASIC15.02■□□□□ -0
SLC6A4P31645 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
SLC6A4P31645 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.02■□□□□ -0
SLC6A4P31645 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.02■□□□□ -0
SLC6A4P31645 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.02■□□□□ -0
SLC6A4P31645 AC003686.1-201ENST00000550956 1034 ntBASIC15.02■□□□□ -0
SLC6A4P31645 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SLC6A4P31645 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.02■□□□□ -0
SLC6A4P31645 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A4P31645 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.02■□□□□ -0
SLC6A4P31645 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.02■□□□□ -0
SLC6A4P31645 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.02■□□□□ -0
SLC6A4P31645 AL157813.1-201ENST00000612996 587 ntBASIC15.02■□□□□ -0
SLC6A4P31645 AL021578.1-201ENST00000613646 709 ntBASIC15.02■□□□□ -0
SLC6A4P31645 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.02■□□□□ -0
SLC6A4P31645 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.02■□□□□ -0
SLC6A4P31645 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.02■□□□□ -0
SLC6A4P31645 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC6A4P31645 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A4P31645 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC6A4P31645 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A4P31645 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SLC6A4P31645 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 LINC00552-201ENST00000625151 2579 ntBASIC15.02□□□□□ -0.01
SLC6A4P31645 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC6A4P31645 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC6A4P31645 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A4P31645 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A4P31645 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A4P31645 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A4P31645 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC6A4P31645 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC6A4P31645 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC6A4P31645 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC6A4P31645 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC6A4P31645 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC6A4P31645 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 AC008132.1-202ENST00000342005 1389 ntBASIC15.01□□□□□ -0.01
SLC6A4P31645 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC6A4P31645 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC6A4P31645 AL157791.1-201ENST00000553667 1699 ntBASIC15.01□□□□□ -0.01
SLC6A4P31645 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC6A4P31645 XBP1P1-201ENST00000436573 652 ntBASIC15.01□□□□□ -0.01
SLC6A4P31645 OR2R1P-201ENST00000441404 914 ntBASIC15.01□□□□□ -0.01
SLC6A4P31645 ST13P19-201ENST00000442505 1124 ntBASIC15.01□□□□□ -0.01
SLC6A4P31645 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC6A4P31645 TPT1P11-201ENST00000458482 498 ntBASIC15.01□□□□□ -0.01
SLC6A4P31645 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC6A4P31645 SORD2P-201ENST00000558556 1069 ntBASIC15.01□□□□□ -0.01
SLC6A4P31645 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A4P31645 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC6A4P31645 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC6A4P31645 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC6A4P31645 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms