Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VARSP26640 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VARSP26640 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.59□□□□□ -0.07
VARSP26640 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.59□□□□□ -0.07
VARSP26640 FAM86MP-201ENST00000340703 885 ntBASIC14.59□□□□□ -0.07
VARSP26640 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VARSP26640 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VARSP26640 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VARSP26640 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.59□□□□□ -0.07
VARSP26640 EIF3FP3-201ENST00000434851 1086 ntBASIC14.59□□□□□ -0.07
VARSP26640 KLF2P4-201ENST00000451959 1225 ntBASIC14.59□□□□□ -0.07
VARSP26640 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 AC006518.1-201ENST00000541449 943 ntBASIC14.59□□□□□ -0.07
VARSP26640 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.59□□□□□ -0.07
VARSP26640 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.59□□□□□ -0.07
VARSP26640 RN7SL219P-201ENST00000582872 296 ntBASIC14.59□□□□□ -0.07
VARSP26640 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.59□□□□□ -0.07
VARSP26640 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 AC055811.4-201ENST00000624039 1754 ntBASIC14.59□□□□□ -0.07
VARSP26640 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VARSP26640 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.59□□□□□ -0.07
VARSP26640 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VARSP26640 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VARSP26640 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
VARSP26640 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
VARSP26640 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VARSP26640 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VARSP26640 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VARSP26640 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.58□□□□□ -0.07
VARSP26640 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.58□□□□□ -0.07
VARSP26640 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.58□□□□□ -0.07
VARSP26640 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VARSP26640 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VARSP26640 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.58□□□□□ -0.08
VARSP26640 LRRC59-203ENST00000576448 1531 ntBASIC14.58□□□□□ -0.08
VARSP26640 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.58□□□□□ -0.08
VARSP26640 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VARSP26640 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
VARSP26640 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
VARSP26640 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 AC026434.2-201ENST00000506094 1078 ntBASIC14.58□□□□□ -0.08
VARSP26640 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.58□□□□□ -0.08
VARSP26640 AC022616.1-201ENST00000518688 554 ntBASIC14.58□□□□□ -0.08
VARSP26640 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.58□□□□□ -0.08
VARSP26640 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC14.58□□□□□ -0.08
VARSP26640 DUX4L47-201ENST00000566374 394 ntBASIC14.58□□□□□ -0.08
VARSP26640 AC010319.3-201ENST00000597028 470 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms