Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NCLP19338 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NCLP19338 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCLP19338 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC17.66■□□□□ 0.42
NCLP19338 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NCLP19338 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.65■□□□□ 0.42
NCLP19338 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 AL512361.1-201ENST00000554200 418 ntBASIC17.65■□□□□ 0.42
NCLP19338 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.65■□□□□ 0.42
NCLP19338 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
NCLP19338 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.65■□□□□ 0.42
NCLP19338 AL109936.8-201ENST00000641772 604 ntBASIC17.65■□□□□ 0.42
NCLP19338 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 AC055811.4-201ENST00000624039 1754 ntBASIC17.65■□□□□ 0.42
NCLP19338 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NCLP19338 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCLP19338 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NCLP19338 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NCLP19338 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
NCLP19338 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 TNN-202ENST00000621086 4234 ntTSL 5 BASIC17.64■□□□□ 0.41
NCLP19338 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCLP19338 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.64■□□□□ 0.41
NCLP19338 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 SPTLC1P1-201ENST00000447199 261 ntBASIC17.64■□□□□ 0.41
NCLP19338 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.64■□□□□ 0.41
NCLP19338 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.64■□□□□ 0.41
NCLP19338 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.64■□□□□ 0.41
NCLP19338 ZNF890P-202ENST00000530367 1156 ntBASIC17.64■□□□□ 0.41
NCLP19338 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.64■□□□□ 0.41
NCLP19338 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.64■□□□□ 0.41
NCLP19338 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.64■□□□□ 0.41
NCLP19338 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCLP19338 AC008738.7-201ENST00000609744 511 ntBASIC17.64■□□□□ 0.41
NCLP19338 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.64■□□□□ 0.41
NCLP19338 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms