Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAP43P17677 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
GAP43P17677 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.17■□□□□ 0.18
GAP43P17677 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
GAP43P17677 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 AL161932.2-201ENST00000435436 679 ntBASIC16.17■□□□□ 0.18
GAP43P17677 HSPB1P2-201ENST00000448722 546 ntBASIC16.17■□□□□ 0.18
GAP43P17677 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.17■□□□□ 0.18
GAP43P17677 RN7SL560P-201ENST00000577943 264 ntBASIC16.17■□□□□ 0.18
GAP43P17677 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
GAP43P17677 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.17■□□□□ 0.18
GAP43P17677 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
GAP43P17677 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.16■□□□□ 0.18
GAP43P17677 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 TMBIM7P-202ENST00000641474 1516 ntBASIC16.16■□□□□ 0.18
GAP43P17677 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.16■□□□□ 0.18
GAP43P17677 AC012441.2-201ENST00000444843 739 ntBASIC16.16■□□□□ 0.18
GAP43P17677 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 RPSAP36-202ENST00000494591 1261 ntBASIC16.16■□□□□ 0.18
GAP43P17677 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
GAP43P17677 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
GAP43P17677 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.16■□□□□ 0.18
GAP43P17677 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.16■□□□□ 0.18
GAP43P17677 AC009884.2-201ENST00000603110 324 ntBASIC16.16■□□□□ 0.18
GAP43P17677 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GAP43P17677 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.16■□□□□ 0.18
GAP43P17677 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
GAP43P17677 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GAP43P17677 AC027601.5-201ENST00000624065 2482 ntBASIC16.16■□□□□ 0.18
GAP43P17677 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAP43P17677 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAP43P17677 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GAP43P17677 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GAP43P17677 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms