Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NCK1P16333 AC004241.5-201ENST00000623870 2448 ntBASIC13.96□□□□□ -0.17
NCK1P16333 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.96□□□□□ -0.17
NCK1P16333 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NCK1P16333 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCK1P16333 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCK1P16333 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.96□□□□□ -0.18
NCK1P16333 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.96□□□□□ -0.18
NCK1P16333 AC068760.1-201ENST00000493579 1953 ntBASIC13.96□□□□□ -0.18
NCK1P16333 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
NCK1P16333 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
NCK1P16333 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCK1P16333 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NCK1P16333 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.96□□□□□ -0.18
NCK1P16333 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NCK1P16333 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.96□□□□□ -0.18
NCK1P16333 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.96□□□□□ -0.18
NCK1P16333 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
NCK1P16333 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
NCK1P16333 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
NCK1P16333 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.95□□□□□ -0.18
NCK1P16333 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.95□□□□□ -0.18
NCK1P16333 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.95□□□□□ -0.18
NCK1P16333 RPSAP43-201ENST00000402237 625 ntBASIC13.95□□□□□ -0.18
NCK1P16333 AC211486.1-202ENST00000416371 468 ntBASIC13.95□□□□□ -0.18
NCK1P16333 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.95□□□□□ -0.18
NCK1P16333 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.95□□□□□ -0.18
NCK1P16333 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 AC211476.1-201ENST00000503899 468 ntBASIC13.95□□□□□ -0.18
NCK1P16333 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.95□□□□□ -0.18
NCK1P16333 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.95□□□□□ -0.18
NCK1P16333 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.95□□□□□ -0.18
NCK1P16333 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NCK1P16333 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NCK1P16333 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NCK1P16333 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCK1P16333 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
NCK1P16333 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 AC003102.2-201ENST00000589195 1469 ntBASIC13.94□□□□□ -0.18
NCK1P16333 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 AC083964.2-201ENST00000623988 2396 ntBASIC13.94□□□□□ -0.18
NCK1P16333 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.94□□□□□ -0.18
NCK1P16333 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NCK1P16333 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NCK1P16333 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCK1P16333 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms