Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.58□□□□□ -0.08
COL6A2P12110 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL6A2P12110 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL6A2P12110 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 AC007541.1-201ENST00000570282 1469 ntBASIC14.57□□□□□ -0.08
COL6A2P12110 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.57□□□□□ -0.08
COL6A2P12110 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.57□□□□□ -0.08
COL6A2P12110 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
COL6A2P12110 FTLP10-202ENST00000505798 471 ntBASIC14.57□□□□□ -0.08
COL6A2P12110 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
COL6A2P12110 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
COL6A2P12110 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 CHCHD2P3-201ENST00000603038 451 ntBASIC14.57□□□□□ -0.08
COL6A2P12110 CU634019.7-201ENST00000624153 1185 ntBASIC14.57□□□□□ -0.08
COL6A2P12110 FP236241.2-201ENST00000624906 1185 ntBASIC14.57□□□□□ -0.08
COL6A2P12110 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL6A2P12110 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
COL6A2P12110 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL6A2P12110 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A2P12110 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A2P12110 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
COL6A2P12110 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 AC073869.1-201ENST00000415574 2762 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 PUDPP3-201ENST00000445368 636 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 ELK1P1-201ENST00000485699 580 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 RFPL4AP1-201ENST00000530883 850 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 AC027796.2-201ENST00000575326 344 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 RN7SL48P-201ENST00000579283 293 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A2P12110 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.56□□□□□ -0.08
COL6A2P12110 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 AL132655.2-201ENST00000596276 594 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 ENPP7P14-201ENST00000621765 1040 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 TUBB8P4-201ENST00000511806 1324 ntBASIC14.56□□□□□ -0.08
COL6A2P12110 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.56□□□□□ -0.08
COL6A2P12110 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
COL6A2P12110 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL6A2P12110 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A2P12110 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A2P12110 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL6A2P12110 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.55□□□□□ -0.08
COL6A2P12110 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
COL6A2P12110 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms