Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.38■□□□□ 0.21
CYP3A4P08684 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 AC006335.1-201ENST00000445200 547 ntBASIC16.38■□□□□ 0.21
CYP3A4P08684 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 RN7SL11P-201ENST00000471305 293 ntBASIC16.38■□□□□ 0.21
CYP3A4P08684 AC140658.4-201ENST00000561990 352 ntBASIC16.38■□□□□ 0.21
CYP3A4P08684 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.38■□□□□ 0.21
CYP3A4P08684 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
CYP3A4P08684 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.38■□□□□ 0.21
CYP3A4P08684 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CYP3A4P08684 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.38■□□□□ 0.21
CYP3A4P08684 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CYP3A4P08684 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.37■□□□□ 0.21
CYP3A4P08684 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CYP3A4P08684 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CYP3A4P08684 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.37■□□□□ 0.21
CYP3A4P08684 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CYP3A4P08684 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.37■□□□□ 0.21
CYP3A4P08684 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 AC007686.3-201ENST00000619017 3487 ntBASIC16.37■□□□□ 0.21
CYP3A4P08684 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CYP3A4P08684 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CYP3A4P08684 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CYP3A4P08684 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.36■□□□□ 0.21
CYP3A4P08684 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
CYP3A4P08684 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CYP3A4P08684 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CYP3A4P08684 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
CYP3A4P08684 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.36■□□□□ 0.21
CYP3A4P08684 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYP3A4P08684 AL662890.1-201ENST00000396818 632 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.36■□□□□ 0.21
CYP3A4P08684 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.36■□□□□ 0.21
CYP3A4P08684 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.36■□□□□ 0.21
CYP3A4P08684 Z97180.1-201ENST00000445173 988 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 IGHJ2P-201ENST00000454480 60 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 AC012618.1-201ENST00000461223 412 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.36■□□□□ 0.21
CYP3A4P08684 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.36■□□□□ 0.21
CYP3A4P08684 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.36■□□□□ 0.21
CYP3A4P08684 AC090857.1-201ENST00000527400 390 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 CHMP4BP1-201ENST00000556017 588 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 RN7SL574P-201ENST00000581512 297 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.36■□□□□ 0.21
CYP3A4P08684 MEG3_2.1-201ENST00000611456 105 ntBASIC16.36■□□□□ 0.21
CYP3A4P08684 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.36■□□□□ 0.21
CYP3A4P08684 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms