Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.9□□□□□ -0.34
SFTPBP07988 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 RRP7BP-205ENST00000566851 833 ntBASIC12.9□□□□□ -0.34
SFTPBP07988 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.9□□□□□ -0.34
SFTPBP07988 AL049840.4-201ENST00000602422 811 ntBASIC12.9□□□□□ -0.34
SFTPBP07988 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SFTPBP07988 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SFTPBP07988 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.9□□□□□ -0.34
SFTPBP07988 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SFTPBP07988 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SFTPBP07988 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SFTPBP07988 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SFTPBP07988 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SFTPBP07988 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SFTPBP07988 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
SFTPBP07988 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.89□□□□□ -0.35
SFTPBP07988 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SFTPBP07988 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SFTPBP07988 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
SFTPBP07988 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 RN7SL399P-201ENST00000471648 279 ntBASIC12.89□□□□□ -0.35
SFTPBP07988 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.89□□□□□ -0.35
SFTPBP07988 CR383656.12-201ENST00000549567 513 ntBASIC12.89□□□□□ -0.35
SFTPBP07988 AC132938.2-201ENST00000579188 680 ntBASIC12.89□□□□□ -0.35
SFTPBP07988 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
SFTPBP07988 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.89□□□□□ -0.35
SFTPBP07988 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 AL591163.1-201ENST00000641757 987 ntBASIC12.89□□□□□ -0.35
SFTPBP07988 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 AC023090.2-201ENST00000625182 2110 ntBASIC12.89□□□□□ -0.35
SFTPBP07988 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SFTPBP07988 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SFTPBP07988 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SFTPBP07988 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.88□□□□□ -0.35
SFTPBP07988 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SFTPBP07988 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SFTPBP07988 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms