Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 TMBIM7P-202ENST00000641474 1516 ntBASIC14.88□□□□□ -0.03
HLA-DQB2P05538 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 AL645933.1-201ENST00000440087 609 ntBASIC14.88□□□□□ -0.03
HLA-DQB2P05538 KLF2P1-201ENST00000447438 1042 ntBASIC14.88□□□□□ -0.03
HLA-DQB2P05538 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.88□□□□□ -0.03
HLA-DQB2P05538 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DQB2P05538 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AC015818.8-201ENST00000587907 1519 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AL354877.1-201ENST00000424412 413 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AL157407.1-201ENST00000435784 904 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 MTX1P1-201ENST00000440904 838 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 HSPB1P2-201ENST00000448722 546 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 RPL13AP20-201ENST00000459725 609 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 RPSAP36-202ENST00000494591 1261 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 MIR6720-201ENST00000611664 98 ntBASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQB2P05538 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQB2P05538 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms