Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 CETN4P-206ENST00000642099 2168 ntBASIC12.72□□□□□ -0.37
HLA-DQB1P01920 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 MIR4469-201ENST00000583919 79 ntBASIC12.72□□□□□ -0.37
HLA-DQB1P01920 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.72□□□□□ -0.37
HLA-DQB1P01920 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.72□□□□□ -0.37
HLA-DQB1P01920 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.71□□□□□ -0.37
HLA-DQB1P01920 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 SPDYE7P-202ENST00000420373 878 ntBASIC12.71□□□□□ -0.37
HLA-DQB1P01920 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 AP001059.3-201ENST00000619053 235 ntBASIC12.71□□□□□ -0.37
HLA-DQB1P01920 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.71□□□□□ -0.37
HLA-DQB1P01920 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQB1P01920 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 AC026271.4-201ENST00000578214 1833 ntBASIC12.71□□□□□ -0.38
HLA-DQB1P01920 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HLA-DQB1P01920 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.7□□□□□ -0.38
HLA-DQB1P01920 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms