Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC11.84□□□□□ -0.51
CRLF1O75462 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 PGAM1P12-201ENST00000505622 748 ntBASIC11.84□□□□□ -0.51
CRLF1O75462 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 THY1-209ENST00000580275 578 ntTSL 3 BASIC11.84□□□□□ -0.51
CRLF1O75462 AP005264.6-204ENST00000588436 719 ntBASIC11.84□□□□□ -0.51
CRLF1O75462 NAMA-206ENST00000605377 509 ntTSL 5 BASIC11.84□□□□□ -0.51
CRLF1O75462 MIR6816-201ENST00000620368 66 ntBASIC11.84□□□□□ -0.51
CRLF1O75462 MIR6746-201ENST00000620971 63 ntBASIC11.84□□□□□ -0.51
CRLF1O75462 AC002044.2-201ENST00000624910 970 ntBASIC11.84□□□□□ -0.51
CRLF1O75462 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
CRLF1O75462 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
CRLF1O75462 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CRLF1O75462 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CRLF1O75462 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.84□□□□□ -0.51
CRLF1O75462 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CRLF1O75462 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
CRLF1O75462 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 AC105917.1-201ENST00000506637 2539 ntBASIC11.84□□□□□ -0.51
CRLF1O75462 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CRLF1O75462 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CRLF1O75462 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CRLF1O75462 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
CRLF1O75462 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
CRLF1O75462 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CRLF1O75462 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CRLF1O75462 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.83□□□□□ -0.52
CRLF1O75462 AC099063.4-201ENST00000641099 1602 ntBASIC11.83□□□□□ -0.52
CRLF1O75462 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.83□□□□□ -0.52
CRLF1O75462 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 KRT18P36-201ENST00000411618 1276 ntBASIC11.83□□□□□ -0.52
CRLF1O75462 BRI3P1-201ENST00000440440 378 ntBASIC11.83□□□□□ -0.52
CRLF1O75462 ERP29P1-201ENST00000442902 706 ntBASIC11.83□□□□□ -0.52
CRLF1O75462 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC11.83□□□□□ -0.52
CRLF1O75462 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 RN7SL23P-201ENST00000484055 275 ntBASIC11.83□□□□□ -0.52
CRLF1O75462 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.83□□□□□ -0.52
CRLF1O75462 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC11.83□□□□□ -0.52
CRLF1O75462 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC11.83□□□□□ -0.52
CRLF1O75462 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CRLF1O75462 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CRLF1O75462 AC012073.1-201ENST00000606114 1108 ntBASIC11.83□□□□□ -0.52
CRLF1O75462 AL627230.2-201ENST00000613254 655 ntBASIC11.83□□□□□ -0.52
CRLF1O75462 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CRLF1O75462 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
CRLF1O75462 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.83□□□□□ -0.52
CRLF1O75462 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.83□□□□□ -0.52
CRLF1O75462 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.83□□□□□ -0.52
CRLF1O75462 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CRLF1O75462 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CRLF1O75462 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.82□□□□□ -0.52
CRLF1O75462 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.82□□□□□ -0.52
CRLF1O75462 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 AC026691.1-201ENST00000602502 2017 ntBASIC11.82□□□□□ -0.52
CRLF1O75462 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.82□□□□□ -0.52
CRLF1O75462 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CRLF1O75462 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms