Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.17□□□□□ -0.3
CYTIPO60759 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 DUX4L46-201ENST00000566845 751 ntBASIC13.17□□□□□ -0.3
CYTIPO60759 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.17□□□□□ -0.3
CYTIPO60759 AC027601.3-201ENST00000622907 509 ntBASIC13.17□□□□□ -0.3
CYTIPO60759 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.17□□□□□ -0.3
CYTIPO60759 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.17□□□□□ -0.3
CYTIPO60759 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.17□□□□□ -0.3
CYTIPO60759 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.17□□□□□ -0.3
CYTIPO60759 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.17□□□□□ -0.3
CYTIPO60759 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.17□□□□□ -0.3
CYTIPO60759 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.17□□□□□ -0.3
CYTIPO60759 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.17□□□□□ -0.3
CYTIPO60759 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYTIPO60759 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.17□□□□□ -0.3
CYTIPO60759 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CYTIPO60759 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CYTIPO60759 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CYTIPO60759 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CYTIPO60759 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.16□□□□□ -0.3
CYTIPO60759 MIR663B-201ENST00000408361 115 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.16□□□□□ -0.3
CYTIPO60759 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.16□□□□□ -0.3
CYTIPO60759 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 ACTBP11-201ENST00000436287 1126 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 AL591846.1-201ENST00000451736 433 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 CICP12-201ENST00000455801 843 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.16□□□□□ -0.3
CYTIPO60759 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.16□□□□□ -0.3
CYTIPO60759 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 AC103988.2-201ENST00000561804 725 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.16□□□□□ -0.3
CYTIPO60759 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.16□□□□□ -0.3
CYTIPO60759 AC132192.2-201ENST00000596206 1147 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 AC009955.4-201ENST00000597192 544 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 AC091271.1-201ENST00000611877 1162 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.16□□□□□ -0.3
CYTIPO60759 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.16□□□□□ -0.3
CYTIPO60759 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.16□□□□□ -0.3
CYTIPO60759 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CYTIPO60759 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CYTIPO60759 AL390755.1-201ENST00000623716 2027 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CYTIPO60759 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 AC139712.1-201ENST00000378256 1875 ntBASIC13.16□□□□□ -0.3
CYTIPO60759 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CYTIPO60759 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.16□□□□□ -0.3
CYTIPO60759 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CYTIPO60759 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CYTIPO60759 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CYTIPO60759 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.15□□□□□ -0.3
CYTIPO60759 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CYTIPO60759 E2F3P2-201ENST00000447755 1422 ntBASIC13.15□□□□□ -0.3
CYTIPO60759 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CYTIPO60759 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms