Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
PDE6DO43924 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PDE6DO43924 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 IGHV3-62-201ENST00000520057 340 ntBASIC11.45□□□□□ -0.58
PDE6DO43924 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.45□□□□□ -0.58
PDE6DO43924 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.45□□□□□ -0.58
PDE6DO43924 PDPK2P-202ENST00000562415 1191 ntBASIC11.45□□□□□ -0.58
PDE6DO43924 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 RARRES2P9-201ENST00000565168 469 ntBASIC11.45□□□□□ -0.58
PDE6DO43924 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.45□□□□□ -0.58
PDE6DO43924 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.45□□□□□ -0.58
PDE6DO43924 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.45□□□□□ -0.58
PDE6DO43924 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 Z97205.2-201ENST00000564697 1639 ntBASIC11.45□□□□□ -0.58
PDE6DO43924 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.45□□□□□ -0.58
PDE6DO43924 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.45□□□□□ -0.58
PDE6DO43924 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PDE6DO43924 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 AC131902.2-201ENST00000566892 2172 ntBASIC11.44□□□□□ -0.58
PDE6DO43924 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 KRT8P12-202ENST00000472924 1397 ntBASIC11.44□□□□□ -0.58
PDE6DO43924 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PDE6DO43924 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PDE6DO43924 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 AP000437.1-201ENST00000624057 2085 ntBASIC11.44□□□□□ -0.58
PDE6DO43924 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 AC079776.4-201ENST00000511039 504 ntBASIC11.44□□□□□ -0.58
PDE6DO43924 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.44□□□□□ -0.58
PDE6DO43924 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 AC034105.1-201ENST00000563488 319 ntBASIC11.44□□□□□ -0.58
PDE6DO43924 AC105021.1-202ENST00000570572 669 ntBASIC11.44□□□□□ -0.58
PDE6DO43924 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.44□□□□□ -0.58
PDE6DO43924 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PDE6DO43924 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.44□□□□□ -0.58
PDE6DO43924 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.44□□□□□ -0.58
PDE6DO43924 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PDE6DO43924 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PDE6DO43924 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PDE6DO43924 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 KRT8P14-201ENST00000414254 1442 ntBASIC11.43□□□□□ -0.58
PDE6DO43924 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6DO43924 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms