Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.85□□□□□ -0.35
XRCC2O43543 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.85□□□□□ -0.35
XRCC2O43543 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 AC025279.2-201ENST00000569730 653 ntBASIC12.85□□□□□ -0.35
XRCC2O43543 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.85□□□□□ -0.35
XRCC2O43543 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 MIR6074-201ENST00000612054 107 ntBASIC12.85□□□□□ -0.35
XRCC2O43543 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 AC027601.5-201ENST00000624065 2482 ntBASIC12.85□□□□□ -0.35
XRCC2O43543 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
XRCC2O43543 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
XRCC2O43543 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
XRCC2O43543 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
XRCC2O43543 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
XRCC2O43543 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.84□□□□□ -0.35
XRCC2O43543 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 TTTY23B-201ENST00000442790 549 ntBASIC12.84□□□□□ -0.35
XRCC2O43543 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.84□□□□□ -0.35
XRCC2O43543 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.84□□□□□ -0.35
XRCC2O43543 MYADML-201ENST00000474610 2147 ntBASIC12.84□□□□□ -0.35
XRCC2O43543 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.84□□□□□ -0.35
XRCC2O43543 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.84□□□□□ -0.35
XRCC2O43543 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.84□□□□□ -0.35
XRCC2O43543 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.84□□□□□ -0.35
XRCC2O43543 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
XRCC2O43543 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 AC233724.13-201ENST00000598383 410 ntBASIC12.84□□□□□ -0.35
XRCC2O43543 BX088702.1-201ENST00000610784 235 ntBASIC12.84□□□□□ -0.35
XRCC2O43543 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 AP000593.2-201ENST00000542775 1433 ntBASIC12.84□□□□□ -0.35
XRCC2O43543 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
XRCC2O43543 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.84□□□□□ -0.35
XRCC2O43543 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.84□□□□□ -0.35
XRCC2O43543 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
XRCC2O43543 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
XRCC2O43543 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
XRCC2O43543 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
XRCC2O43543 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.83□□□□□ -0.35
XRCC2O43543 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
XRCC2O43543 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
XRCC2O43543 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms