Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A1O14983 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP2A1O14983 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A1O14983 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A1O14983 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A1O14983 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
ATP2A1O14983 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP2A1O14983 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A1O14983 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ATP2A1O14983 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ATP2A1O14983 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A1O14983 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A1O14983 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A1O14983 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A1O14983 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.76■□□□□ 0.27
ATP2A1O14983 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP2A1O14983 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ATP2A1O14983 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP2A1O14983 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP2A1O14983 NOC2LP1-201ENST00000450578 752 ntBASIC16.76■□□□□ 0.27
ATP2A1O14983 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A1O14983 AC103810.10-201ENST00000606504 343 ntBASIC16.76■□□□□ 0.27
ATP2A1O14983 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A1O14983 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
ATP2A1O14983 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATP2A1O14983 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A1O14983 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ATP2A1O14983 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 AC015909.3-201ENST00000572855 1794 ntBASIC16.75■□□□□ 0.27
ATP2A1O14983 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 BANF1P3-201ENST00000412556 261 ntBASIC16.75■□□□□ 0.27
ATP2A1O14983 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 AC069218.1-201ENST00000435269 762 ntBASIC16.75■□□□□ 0.27
ATP2A1O14983 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 AC130709.1-201ENST00000484779 1212 ntBASIC16.75■□□□□ 0.27
ATP2A1O14983 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 AC073352.2-201ENST00000609385 439 ntBASIC16.75■□□□□ 0.27
ATP2A1O14983 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.75■□□□□ 0.27
ATP2A1O14983 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A1O14983 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATP2A1O14983 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 DBET-201ENST00000630918 3363 ntBASIC16.75■□□□□ 0.27
ATP2A1O14983 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A1O14983 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A1O14983 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms