Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.71■□□□□ 0.11
O00370 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.71■□□□□ 0.11
O00370 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.71■□□□□ 0.11
O00370 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
O00370 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
O00370 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.71■□□□□ 0.1
O00370 AL023775.1-201ENST00000454907 1746 ntBASIC15.71■□□□□ 0.1
O00370 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
O00370 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
O00370 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
O00370 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
O00370 AL590440.2-201ENST00000641973 1595 ntBASIC15.7■□□□□ 0.1
O00370 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
O00370 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.7■□□□□ 0.1
O00370 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 AC015802.1-201ENST00000588104 1449 ntBASIC15.7■□□□□ 0.1
O00370 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.7■□□□□ 0.1
O00370 RNA5SP412-201ENST00000516234 123 ntBASIC15.7■□□□□ 0.1
O00370 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.7■□□□□ 0.1
O00370 AC103988.2-201ENST00000561804 725 ntBASIC15.7■□□□□ 0.1
O00370 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.7■□□□□ 0.1
O00370 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.7■□□□□ 0.1
O00370 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
O00370 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
O00370 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
O00370 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
O00370 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.7■□□□□ 0.1
O00370 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.7■□□□□ 0.1
O00370 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
O00370 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.7■□□□□ 0.1
O00370 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.7■□□□□ 0.1
O00370 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
O00370 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.69■□□□□ 0.1
O00370 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
O00370 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.69■□□□□ 0.1
O00370 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.69■□□□□ 0.1
O00370 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
O00370 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
O00370 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 AC010141.1-201ENST00000411585 623 ntBASIC15.69■□□□□ 0.1
O00370 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.69■□□□□ 0.1
O00370 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
O00370 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.69■□□□□ 0.1
O00370 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
O00370 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.69■□□□□ 0.1
O00370 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.69■□□□□ 0.1
O00370 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
O00370 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.69■□□□□ 0.1
O00370 MIR4741-201ENST00000579822 90 ntBASIC15.69■□□□□ 0.1
O00370 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.69■□□□□ 0.1
O00370 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms