Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 MYADML-201ENST00000474610 2147 ntBASIC10.51□□□□□ -0.73
LYRM9A8MSI8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 AC087386.2-201ENST00000623212 4637 ntBASIC10.51□□□□□ -0.73
LYRM9A8MSI8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LYRM9A8MSI8 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CICP24-201ENST00000605464 2705 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 MIR663B-201ENST00000408361 115 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 HNRNPA1P27-201ENST00000412087 955 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 RPSAP36-202ENST00000494591 1261 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 FAM8A2P-201ENST00000528813 1142 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC027237.1-201ENST00000560942 655 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC009955.4-201ENST00000597192 544 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 MIR6720-201ENST00000611664 98 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC091271.1-201ENST00000611877 1162 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 KRT8P29-201ENST00000420409 1371 ntBASIC10.5□□□□□ -0.73
LYRM9A8MSI8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.5□□□□□ -0.73
LYRM9A8MSI8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.49□□□□□ -0.73
LYRM9A8MSI8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms