Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.28■□□□□ 0.04
YJEFN3A6XGL0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 RN7SL832P-201ENST00000607781 1756 ntBASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 AC023908.3-201ENST00000564211 3047 ntBASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 AC106794.1-201ENST00000506935 792 ntBASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 MIR6074-201ENST00000612054 107 ntBASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.27■□□□□ 0.04
YJEFN3A6XGL0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
YJEFN3A6XGL0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 AC012617.1-204ENST00000586340 2305 ntBASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 AC016700.1-201ENST00000429424 312 ntBASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 AC133540.1-201ENST00000620845 1019 ntBASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
YJEFN3A6XGL0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
YJEFN3A6XGL0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms