Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AC139712.1-201ENST00000378256 1875 ntBASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AC215219.1-201ENST00000400706 1817 ntBASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 PUDPP3-201ENST00000445368 636 ntBASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AP000812.2-201ENST00000538934 718 ntBASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 AC002472.3-201ENST00000640124 621 ntBASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC162PA2VCL2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 AC012617.1-204ENST00000586340 2305 ntBASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 RPL7P3-201ENST00000441388 714 ntBASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 KRT17P8-201ENST00000540749 863 ntBASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 KHSRPP1-201ENST00000427983 1768 ntBASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 RN7SL832P-201ENST00000607781 1756 ntBASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC162PA2VCL2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms