Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
DUXBA0A1W2PPF3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
DUXBA0A1W2PPF3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
DUXBA0A1W2PPF3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
DUXBA0A1W2PPF3 AC072061.1-201ENST00000569710 2234 ntBASIC12.05□□□□□ -0.48
DUXBA0A1W2PPF3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 NUTM2HP-201ENST00000442076 2498 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AL139400.1-201ENST00000366220 510 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AL391647.1-201ENST00000395664 511 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC114501.2-201ENST00000439631 535 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC026434.2-201ENST00000506094 1078 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 KRT18P58-201ENST00000527480 1120 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC103988.2-201ENST00000561804 725 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 NCLP1-201ENST00000445357 1963 ntBASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
DUXBA0A1W2PPF3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DUXBA0A1W2PPF3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms