Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.73□□□□□ -0.37
TRAV18A0A075B6X5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 TUBB3P1-201ENST00000405796 1332 ntBASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 AL645937.2-201ENST00000396808 931 ntBASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV18A0A075B6X5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AGAP10P-201ENST00000454844 2418 ntBASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AL136172.1-201ENST00000598590 1394 ntBASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AL353779.1-201ENST00000434793 351 ntBASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 TIMM17BP1-201ENST00000545713 516 ntBASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AC010336.2-201ENST00000564226 506 ntBASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms