Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CLIC4Q9Y696 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLIC4Q9Y696 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLIC4Q9Y696 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CLIC4Q9Y696 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.08■■□□□ 1.77
CLIC4Q9Y696 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.08■■□□□ 1.77
CLIC4Q9Y696 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLIC4Q9Y696 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 ALDH1A3-203ENST00000557963 1670 ntBASIC26.07■■□□□ 1.76
CLIC4Q9Y696 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLIC4Q9Y696 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLIC4Q9Y696 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.06■■□□□ 1.76
CLIC4Q9Y696 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLIC4Q9Y696 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.06■■□□□ 1.76
CLIC4Q9Y696 MIR4508-201ENST00000584178 70 ntBASIC26.06■■□□□ 1.76
CLIC4Q9Y696 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLIC4Q9Y696 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.06■■□□□ 1.76
CLIC4Q9Y696 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CLIC4Q9Y696 AC012676.1-201ENST00000574705 1949 ntBASIC26.06■■□□□ 1.76
CLIC4Q9Y696 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.05■■□□□ 1.76
CLIC4Q9Y696 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLIC4Q9Y696 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 KRT8P33-201ENST00000508125 1423 ntBASIC26.03■■□□□ 1.76
CLIC4Q9Y696 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLIC4Q9Y696 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLIC4Q9Y696 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLIC4Q9Y696 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CLIC4Q9Y696 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CLIC4Q9Y696 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CLIC4Q9Y696 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLIC4Q9Y696 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.01■■□□□ 1.75
CLIC4Q9Y696 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26■■□□□ 1.75
CLIC4Q9Y696 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLIC4Q9Y696 AC092068.2-201ENST00000590491 1708 ntBASIC26■■□□□ 1.75
CLIC4Q9Y696 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CLIC4Q9Y696 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLIC4Q9Y696 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CLIC4Q9Y696 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 AC103724.3-201ENST00000564481 992 ntBASIC25.98■■□□□ 1.75
CLIC4Q9Y696 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLIC4Q9Y696 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms