Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC005837.3-201ENST00000612163 286 ntBASIC21.9■■□□□ 1.1
PCDHGA6Q9Y5G7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.9■■□□□ 1.1
PCDHGA6Q9Y5G7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA6Q9Y5G7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA6Q9Y5G7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA6Q9Y5G7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA6Q9Y5G7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA6Q9Y5G7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDHGA6Q9Y5G7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGA6Q9Y5G7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA6Q9Y5G7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHGA6Q9Y5G7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGA6Q9Y5G7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGA6Q9Y5G7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGA6Q9Y5G7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
PCDHGA6Q9Y5G7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA6Q9Y5G7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA6Q9Y5G7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA6Q9Y5G7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA6Q9Y5G7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA6Q9Y5G7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA6Q9Y5G7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHGA6Q9Y5G7 AC012676.1-201ENST00000574705 1949 ntBASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 AP003733.4-201ENST00000623785 1697 ntBASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA6Q9Y5G7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA6Q9Y5G7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA6Q9Y5G7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHGA6Q9Y5G7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
PCDHGA6Q9Y5G7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA6Q9Y5G7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA6Q9Y5G7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA6Q9Y5G7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA6Q9Y5G7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA6Q9Y5G7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHGA6Q9Y5G7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA6Q9Y5G7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA6Q9Y5G7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA6Q9Y5G7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
PCDHGA6Q9Y5G7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA6Q9Y5G7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHGA6Q9Y5G7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA6Q9Y5G7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 AC106739.1-201ENST00000617035 715 ntBASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGA6Q9Y5G7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA6Q9Y5G7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PCDHGA6Q9Y5G7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms