Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 AL117332.1-201ENST00000622628 974 ntBASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGB6Q9Y5F9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGB6Q9Y5F9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGB6Q9Y5F9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGB6Q9Y5F9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGB6Q9Y5F9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGB6Q9Y5F9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGB6Q9Y5F9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGB6Q9Y5F9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 AL356740.2-201ENST00000601559 647 ntBASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDHGB6Q9Y5F9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 AC131281.2-201ENST00000520478 145 ntBASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHGB6Q9Y5F9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHGB6Q9Y5F9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 MIR6722-201ENST00000617286 78 ntBASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGB6Q9Y5F9 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGB6Q9Y5F9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCDHGB6Q9Y5F9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGB6Q9Y5F9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGB6Q9Y5F9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGB6Q9Y5F9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGB6Q9Y5F9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB6Q9Y5F9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB6Q9Y5F9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDHGB6Q9Y5F9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB6Q9Y5F9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGB6Q9Y5F9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB6Q9Y5F9 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGB6Q9Y5F9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.31■■□□□ 1
PCDHGB6Q9Y5F9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGB6Q9Y5F9 SNX5-217ENST00000606557 1087 ntBASIC21.31■■□□□ 1
PCDHGB6Q9Y5F9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms