Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHB9Q9Y5E1 AL161729.1-201ENST00000604104 1402 ntBASIC23.16■■□□□ 1.3
PCDHB9Q9Y5E1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PCDHB9Q9Y5E1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB9Q9Y5E1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHB9Q9Y5E1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB9Q9Y5E1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB9Q9Y5E1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB9Q9Y5E1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB9Q9Y5E1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHB9Q9Y5E1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHB9Q9Y5E1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB9Q9Y5E1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB9Q9Y5E1 PBX2P1-201ENST00000493219 1291 ntBASIC23.14■■□□□ 1.29
PCDHB9Q9Y5E1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB9Q9Y5E1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB9Q9Y5E1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHB9Q9Y5E1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 AC142381.2-201ENST00000566120 298 ntBASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 RARRES2P6-201ENST00000567333 442 ntBASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 AC141586.4-201ENST00000624558 1573 ntBASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHB9Q9Y5E1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB9Q9Y5E1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 MIR6722-201ENST00000617286 78 ntBASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB9Q9Y5E1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHB9Q9Y5E1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 ZNRF2P3-201ENST00000424200 374 ntBASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 AL512631.2-201ENST00000604634 923 ntBASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 AC106739.1-201ENST00000617035 715 ntBASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB9Q9Y5E1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB9Q9Y5E1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB9Q9Y5E1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB9Q9Y5E1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB9Q9Y5E1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHB9Q9Y5E1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHB9Q9Y5E1 AC004812.2-201ENST00000611079 2094 ntBASIC23.07■■□□□ 1.28
PCDHB9Q9Y5E1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHB9Q9Y5E1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB9Q9Y5E1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB9Q9Y5E1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB9Q9Y5E1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDHB9Q9Y5E1 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms