Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RNF11Q9Y3C5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 AC131274.2-201ENST00000580697 1507 ntBASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF11Q9Y3C5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 KRT18P24-201ENST00000344739 1156 ntBASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RNF11Q9Y3C5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF11Q9Y3C5 THA1P-201ENST00000590384 1145 ntBASIC22.14■■□□□ 1.13
RNF11Q9Y3C5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF11Q9Y3C5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF11Q9Y3C5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
RNF11Q9Y3C5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF11Q9Y3C5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF11Q9Y3C5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
RNF11Q9Y3C5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF11Q9Y3C5 MIR4281-201ENST00000580852 62 ntBASIC22.13■■□□□ 1.13
RNF11Q9Y3C5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF11Q9Y3C5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF11Q9Y3C5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RNF11Q9Y3C5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.13■■□□□ 1.13
RNF11Q9Y3C5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF11Q9Y3C5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 C9orf163-202ENST00000624034 2573 ntBASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 AF131216.4-201ENST00000638924 1588 ntBASIC22.12■■□□□ 1.13
RNF11Q9Y3C5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 AC103834.1-201ENST00000520383 144 ntBASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 MIR4508-201ENST00000584178 70 ntBASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RNF11Q9Y3C5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RNF11Q9Y3C5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms