Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LSM2Q9Y333 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.31■□□□□ 0.84
LSM2Q9Y333 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.31■□□□□ 0.84
LSM2Q9Y333 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.31■□□□□ 0.84
LSM2Q9Y333 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM2Q9Y333 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LSM2Q9Y333 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LSM2Q9Y333 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 AC242852.2-201ENST00000615738 1807 ntBASIC20.3■□□□□ 0.84
LSM2Q9Y333 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 AC092296.2-201ENST00000589470 999 ntBASIC20.3■□□□□ 0.84
LSM2Q9Y333 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LSM2Q9Y333 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.29■□□□□ 0.84
LSM2Q9Y333 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.29■□□□□ 0.84
LSM2Q9Y333 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.29■□□□□ 0.84
LSM2Q9Y333 RP9P-202ENST00000450133 1212 ntBASIC20.29■□□□□ 0.84
LSM2Q9Y333 ZNRF2P2-203ENST00000454624 420 ntBASIC20.29■□□□□ 0.84
LSM2Q9Y333 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM2Q9Y333 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.29■□□□□ 0.84
LSM2Q9Y333 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LSM2Q9Y333 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.28■□□□□ 0.84
LSM2Q9Y333 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LSM2Q9Y333 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LSM2Q9Y333 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.28■□□□□ 0.84
LSM2Q9Y333 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LSM2Q9Y333 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.28■□□□□ 0.84
LSM2Q9Y333 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LSM2Q9Y333 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM2Q9Y333 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LSM2Q9Y333 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LSM2Q9Y333 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM2Q9Y333 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM2Q9Y333 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.27■□□□□ 0.84
LSM2Q9Y333 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.27■□□□□ 0.84
LSM2Q9Y333 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.27■□□□□ 0.84
LSM2Q9Y333 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSM2Q9Y333 AC093536.1-201ENST00000569153 554 ntBASIC20.27■□□□□ 0.84
LSM2Q9Y333 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.27■□□□□ 0.84
LSM2Q9Y333 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.27■□□□□ 0.84
LSM2Q9Y333 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
LSM2Q9Y333 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM2Q9Y333 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM2Q9Y333 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.26■□□□□ 0.83
LSM2Q9Y333 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSM2Q9Y333 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.26■□□□□ 0.83
LSM2Q9Y333 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.26■□□□□ 0.83
LSM2Q9Y333 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM2Q9Y333 KRT18P10-201ENST00000388836 1287 ntBASIC20.26■□□□□ 0.83
LSM2Q9Y333 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM2Q9Y333 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSM2Q9Y333 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSM2Q9Y333 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSM2Q9Y333 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM2Q9Y333 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
LSM2Q9Y333 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM2Q9Y333 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSM2Q9Y333 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.25■□□□□ 0.83
LSM2Q9Y333 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSM2Q9Y333 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSM2Q9Y333 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 ESRRAP2-201ENST00000418437 1549 ntBASIC20.24■□□□□ 0.83
LSM2Q9Y333 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LSM2Q9Y333 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM2Q9Y333 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM2Q9Y333 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSM2Q9Y333 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LSM2Q9Y333 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LSM2Q9Y333 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM2Q9Y333 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.23■□□□□ 0.83
LSM2Q9Y333 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LSM2Q9Y333 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM2Q9Y333 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.23■□□□□ 0.83
LSM2Q9Y333 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.23■□□□□ 0.83
LSM2Q9Y333 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM2Q9Y333 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LSM2Q9Y333 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM2Q9Y333 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms