Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
PHF8Q9UPP1 AC092803.2-201ENST00000564287 1899 ntBASIC31.49■■■□□ 2.63
PHF8Q9UPP1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC31.49■■■□□ 2.63
PHF8Q9UPP1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PHF8Q9UPP1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC31.49■■■□□ 2.63
PHF8Q9UPP1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PHF8Q9UPP1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
PHF8Q9UPP1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.48■■■□□ 2.63
PHF8Q9UPP1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
PHF8Q9UPP1 YBX1P1-201ENST00000445822 960 ntBASIC31.48■■■□□ 2.63
PHF8Q9UPP1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.48■■■□□ 2.63
PHF8Q9UPP1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.48■■■□□ 2.63
PHF8Q9UPP1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.47■■■□□ 2.63
PHF8Q9UPP1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.47■■■□□ 2.63
PHF8Q9UPP1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.47■■■□□ 2.63
PHF8Q9UPP1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
PHF8Q9UPP1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC31.47■■■□□ 2.63
PHF8Q9UPP1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PHF8Q9UPP1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PHF8Q9UPP1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 AC092437.1-201ENST00000624794 1048 ntBASIC31.46■■■□□ 2.63
PHF8Q9UPP1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PHF8Q9UPP1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
PHF8Q9UPP1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.45■■■□□ 2.63
PHF8Q9UPP1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC31.45■■■□□ 2.63
PHF8Q9UPP1 AL137784.2-201ENST00000607332 1000 ntBASIC31.45■■■□□ 2.63
PHF8Q9UPP1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
PHF8Q9UPP1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
PHF8Q9UPP1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
PHF8Q9UPP1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
PHF8Q9UPP1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
PHF8Q9UPP1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC31.44■■■□□ 2.62
PHF8Q9UPP1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC31.44■■■□□ 2.62
PHF8Q9UPP1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4L2-201ENST00000561772 1275 ntBASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4L6-201ENST00000626483 1275 ntBASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4L1-201ENST00000627662 1275 ntBASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4L8-201ENST00000629013 1275 ntBASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4L3-201ENST00000630187 1275 ntBASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4L7-201ENST00000630678 1275 ntBASIC31.44■■■□□ 2.62
PHF8Q9UPP1 DUX4L5-201ENST00000630834 1275 ntBASIC31.44■■■□□ 2.62
PHF8Q9UPP1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
PHF8Q9UPP1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 AC126544.1-201ENST00000580842 1059 ntBASIC31.43■■■□□ 2.62
PHF8Q9UPP1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHF8Q9UPP1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC31.42■■■□□ 2.62
PHF8Q9UPP1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PHF8Q9UPP1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 pRNA.6-201ENST00000610482 90 ntBASIC31.41■■■□□ 2.62
PHF8Q9UPP1 pRNA.5-201ENST00000612139 90 ntBASIC31.41■■■□□ 2.62
PHF8Q9UPP1 pRNA.11-201ENST00000618423 90 ntBASIC31.41■■■□□ 2.62
PHF8Q9UPP1 pRNA.13-201ENST00000619112 90 ntBASIC31.41■■■□□ 2.62
PHF8Q9UPP1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
PHF8Q9UPP1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.4■■■□□ 2.62
PHF8Q9UPP1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 TSPY26P-201ENST00000476365 1326 ntBASIC31.4■■■□□ 2.62
PHF8Q9UPP1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHF8Q9UPP1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PHF8Q9UPP1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PHF8Q9UPP1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC31.38■■■□□ 2.61
PHF8Q9UPP1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
PHF8Q9UPP1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.38■■■□□ 2.61
PHF8Q9UPP1 NME4-202ENST00000382940 766 ntTSL 3 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms