Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
NPIPA1Q9UND3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.95
NPIPA1Q9UND3 AC093323.1-202ENST00000635031 2045 ntBASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.95■□□□□ 0.94
NPIPA1Q9UND3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA1Q9UND3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.94■□□□□ 0.94
NPIPA1Q9UND3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NPIPA1Q9UND3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA1Q9UND3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.94■□□□□ 0.94
NPIPA1Q9UND3 AC004448.1-201ENST00000458332 883 ntBASIC20.94■□□□□ 0.94
NPIPA1Q9UND3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPIPA1Q9UND3 LINC01124-201ENST00000409786 2117 ntBASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 PBX2P1-201ENST00000493219 1291 ntBASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
NPIPA1Q9UND3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA1Q9UND3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 AC133561.4-201ENST00000566112 224 ntBASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.91■□□□□ 0.94
NPIPA1Q9UND3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA1Q9UND3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA1Q9UND3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA1Q9UND3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NPIPA1Q9UND3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NPIPA1Q9UND3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.9■□□□□ 0.94
NPIPA1Q9UND3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA1Q9UND3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPIPA1Q9UND3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
NPIPA1Q9UND3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NPIPA1Q9UND3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.89■□□□□ 0.93
NPIPA1Q9UND3 UNC93B3-201ENST00000308076 687 ntBASIC20.89■□□□□ 0.93
NPIPA1Q9UND3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA1Q9UND3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA1Q9UND3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA1Q9UND3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA1Q9UND3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 AC005703.6-201ENST00000623265 1329 ntBASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 AC106739.1-201ENST00000617035 715 ntBASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA1Q9UND3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPA1Q9UND3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NPIPA1Q9UND3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPA1Q9UND3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPA1Q9UND3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 AL136162.1-201ENST00000607711 1078 ntBASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPA1Q9UND3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 AC141586.4-201ENST00000624558 1573 ntBASIC20.85■□□□□ 0.93
NPIPA1Q9UND3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.84■□□□□ 0.93
NPIPA1Q9UND3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA1Q9UND3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms