Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC33.12■■■□□ 2.89
SLC52A1Q9NWF4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SLC52A1Q9NWF4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC33.1■■■□□ 2.89
SLC52A1Q9NWF4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC33.1■■■□□ 2.89
SLC52A1Q9NWF4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
SLC52A1Q9NWF4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SLC52A1Q9NWF4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 YBX1P1-201ENST00000445822 960 ntBASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 RARRES2P11-201ENST00000635158 484 ntBASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
SLC52A1Q9NWF4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
SLC52A1Q9NWF4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SLC52A1Q9NWF4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SLC52A1Q9NWF4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SLC52A1Q9NWF4 AL161729.1-201ENST00000604104 1402 ntBASIC33.08■■■□□ 2.89
SLC52A1Q9NWF4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC33.07■■■□□ 2.89
SLC52A1Q9NWF4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC33.07■■■□□ 2.88
SLC52A1Q9NWF4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
SLC52A1Q9NWF4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC33.07■■■□□ 2.88
SLC52A1Q9NWF4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
SLC52A1Q9NWF4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SLC52A1Q9NWF4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC33.06■■■□□ 2.88
SLC52A1Q9NWF4 AC022517.1-201ENST00000592429 346 ntBASIC33.06■■■□□ 2.88
SLC52A1Q9NWF4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
SLC52A1Q9NWF4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC33.05■■■□□ 2.88
SLC52A1Q9NWF4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
SLC52A1Q9NWF4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
SLC52A1Q9NWF4 AC090192.1-201ENST00000517740 490 ntBASIC33.04■■■□□ 2.88
SLC52A1Q9NWF4 AL031602.1-201ENST00000633169 911 ntBASIC33.04■■■□□ 2.88
SLC52A1Q9NWF4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
SLC52A1Q9NWF4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC33.03■■■□□ 2.88
SLC52A1Q9NWF4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC33.03■■■□□ 2.88
SLC52A1Q9NWF4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
SLC52A1Q9NWF4 KRT18P5-201ENST00000436075 1291 ntBASIC33.03■■■□□ 2.88
SLC52A1Q9NWF4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC33.03■■■□□ 2.88
SLC52A1Q9NWF4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
SLC52A1Q9NWF4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
SLC52A1Q9NWF4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 pRNA.6-201ENST00000610482 90 ntBASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 pRNA.5-201ENST00000612139 90 ntBASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 IKBKGP1-201ENST00000612193 1073 ntBASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 pRNA.11-201ENST00000618423 90 ntBASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 pRNA.13-201ENST00000619112 90 ntBASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SLC52A1Q9NWF4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
SLC52A1Q9NWF4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
SLC52A1Q9NWF4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
SLC52A1Q9NWF4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
SLC52A1Q9NWF4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC33.01■■■□□ 2.87
SLC52A1Q9NWF4 AC126544.1-201ENST00000580842 1059 ntBASIC33.01■■■□□ 2.87
SLC52A1Q9NWF4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC33■■■□□ 2.87
SLC52A1Q9NWF4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SLC52A1Q9NWF4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC33■■■□□ 2.87
SLC52A1Q9NWF4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
SLC52A1Q9NWF4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 DUX4L2-201ENST00000561772 1275 ntBASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 DUX4L6-201ENST00000626483 1275 ntBASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 DUX4L1-201ENST00000627662 1275 ntBASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 DUX4L8-201ENST00000629013 1275 ntBASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 DUX4L3-201ENST00000630187 1275 ntBASIC32.99■■■□□ 2.87
SLC52A1Q9NWF4 DUX4L7-201ENST00000630678 1275 ntBASIC32.99■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms