Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 AC092028.1-203ENST00000608262 953 ntBASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
NECTIN3Q9NQS3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NECTIN3Q9NQS3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN3Q9NQS3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN3Q9NQS3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
NECTIN3Q9NQS3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN3Q9NQS3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NECTIN3Q9NQS3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 TSPY9P-201ENST00000440215 945 ntBASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 TSPY11P-201ENST00000442607 1045 ntBASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 UNC93B8-201ENST00000511903 705 ntBASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.69■■□□□ 1.06
NECTIN3Q9NQS3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 LINC01124-201ENST00000409786 2117 ntBASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NECTIN3Q9NQS3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 AC131274.2-201ENST00000580697 1507 ntBASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NECTIN3Q9NQS3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 SNX5-217ENST00000606557 1087 ntBASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NECTIN3Q9NQS3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
NECTIN3Q9NQS3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NECTIN3Q9NQS3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
NECTIN3Q9NQS3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.64■■□□□ 1.06
NECTIN3Q9NQS3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NECTIN3Q9NQS3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms