Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.42■□□□□ 0.7
MED28Q9H204 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MED28Q9H204 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MED28Q9H204 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
MED28Q9H204 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MED28Q9H204 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MED28Q9H204 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MED28Q9H204 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MED28Q9H204 AC242852.2-201ENST00000615738 1807 ntBASIC19.4■□□□□ 0.7
MED28Q9H204 SETD8P1-201ENST00000623146 1180 ntBASIC19.4■□□□□ 0.7
MED28Q9H204 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MED28Q9H204 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MED28Q9H204 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MED28Q9H204 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MED28Q9H204 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
MED28Q9H204 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
MED28Q9H204 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 AC092068.2-201ENST00000590491 1708 ntBASIC19.39■□□□□ 0.69
MED28Q9H204 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MED28Q9H204 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MED28Q9H204 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MED28Q9H204 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MED28Q9H204 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.38■□□□□ 0.69
MED28Q9H204 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.38■□□□□ 0.69
MED28Q9H204 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MED28Q9H204 MIR6090-201ENST00000622481 60 ntBASIC19.38■□□□□ 0.69
MED28Q9H204 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
MED28Q9H204 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MED28Q9H204 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MED28Q9H204 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.37■□□□□ 0.69
MED28Q9H204 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MED28Q9H204 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.37■□□□□ 0.69
MED28Q9H204 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MED28Q9H204 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MED28Q9H204 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MED28Q9H204 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.37■□□□□ 0.69
MED28Q9H204 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.37■□□□□ 0.69
MED28Q9H204 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MED28Q9H204 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MED28Q9H204 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MED28Q9H204 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MED28Q9H204 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MED28Q9H204 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
MED28Q9H204 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MED28Q9H204 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
MED28Q9H204 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.36■□□□□ 0.69
MED28Q9H204 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MED28Q9H204 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MED28Q9H204 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.36■□□□□ 0.69
MED28Q9H204 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MED28Q9H204 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.36■□□□□ 0.69
MED28Q9H204 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MED28Q9H204 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MED28Q9H204 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MED28Q9H204 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MED28Q9H204 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MED28Q9H204 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.35■□□□□ 0.69
MED28Q9H204 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 MIR762-201ENST00000390236 83 ntBASIC19.35■□□□□ 0.69
MED28Q9H204 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MED28Q9H204 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.35■□□□□ 0.69
MED28Q9H204 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MED28Q9H204 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.35■□□□□ 0.69
MED28Q9H204 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MED28Q9H204 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MED28Q9H204 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MED28Q9H204 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.34■□□□□ 0.69
MED28Q9H204 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms