Protein–RNA interactions for Protein: Q9BUF7

CRB3, Protein crumbs homolog 3, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3Q9BUF7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CRB3Q9BUF7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 AC020928.2-201ENST00000588717 2197 ntBASIC21.38■■□□□ 1.01
CRB3Q9BUF7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CRB3Q9BUF7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CRB3Q9BUF7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CRB3Q9BUF7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CRB3Q9BUF7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.35■■□□□ 1.01
CRB3Q9BUF7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CRB3Q9BUF7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.35■■□□□ 1.01
CRB3Q9BUF7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CRB3Q9BUF7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CRB3Q9BUF7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CRB3Q9BUF7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 ALDH1A3-203ENST00000557963 1670 ntBASIC21.34■■□□□ 1.01
CRB3Q9BUF7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.34■■□□□ 1.01
CRB3Q9BUF7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 AC009102.2-201ENST00000606772 1639 ntBASIC21.34■■□□□ 1.01
CRB3Q9BUF7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 UNC93B3-201ENST00000308076 687 ntBASIC21.34■■□□□ 1.01
CRB3Q9BUF7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRB3Q9BUF7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 PBX2P1-201ENST00000493219 1291 ntBASIC21.33■■□□□ 1.01
CRB3Q9BUF7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CRB3Q9BUF7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.32■■□□□ 1
CRB3Q9BUF7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CRB3Q9BUF7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.32■■□□□ 1
CRB3Q9BUF7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CRB3Q9BUF7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.32■■□□□ 1
CRB3Q9BUF7 AL136162.1-201ENST00000607711 1078 ntBASIC21.32■■□□□ 1
CRB3Q9BUF7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.32■■□□□ 1
CRB3Q9BUF7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.31■■□□□ 1
CRB3Q9BUF7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CRB3Q9BUF7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.31■■□□□ 1
CRB3Q9BUF7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.31■■□□□ 1
CRB3Q9BUF7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.31■■□□□ 1
CRB3Q9BUF7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRB3Q9BUF7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.31■■□□□ 1
CRB3Q9BUF7 AC092171.4-201ENST00000609130 632 ntBASIC21.31■■□□□ 1
CRB3Q9BUF7 AC106739.1-201ENST00000617035 715 ntBASIC21.31■■□□□ 1
CRB3Q9BUF7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.31■■□□□ 1
CRB3Q9BUF7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CRB3Q9BUF7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CRB3Q9BUF7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CRB3Q9BUF7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CRB3Q9BUF7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRB3Q9BUF7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRB3Q9BUF7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CRB3Q9BUF7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.3■■□□□ 1
CRB3Q9BUF7 DUX4L19-201ENST00000557448 1267 ntBASIC21.3■■□□□ 1
CRB3Q9BUF7 AC005837.3-201ENST00000612163 286 ntBASIC21.3■■□□□ 1
CRB3Q9BUF7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.3■■□□□ 1
CRB3Q9BUF7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.3■■□□□ 1
CRB3Q9BUF7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CRB3Q9BUF7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms