Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NICN1Q9BSH3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 AC233723.2-201ENST00000623798 2106 ntBASIC19.48■□□□□ 0.71
NICN1Q9BSH3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 SPCS2P3-201ENST00000500401 656 ntBASIC19.48■□□□□ 0.71
NICN1Q9BSH3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.48■□□□□ 0.71
NICN1Q9BSH3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NICN1Q9BSH3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 AC092068.2-201ENST00000590491 1708 ntBASIC19.46■□□□□ 0.71
NICN1Q9BSH3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.46■□□□□ 0.71
NICN1Q9BSH3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NICN1Q9BSH3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 AL592293.1-201ENST00000502889 1188 ntBASIC19.45■□□□□ 0.7
NICN1Q9BSH3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 C1orf229-201ENST00000623686 2258 ntBASIC19.45■□□□□ 0.7
NICN1Q9BSH3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NICN1Q9BSH3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 AC018755.3-202ENST00000596210 929 ntBASIC19.44■□□□□ 0.7
NICN1Q9BSH3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NICN1Q9BSH3 EP400NL-214ENST00000641289 2402 ntBASIC19.43■□□□□ 0.7
NICN1Q9BSH3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NICN1Q9BSH3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 AL592295.1-201ENST00000400984 884 ntBASIC19.42■□□□□ 0.7
NICN1Q9BSH3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NICN1Q9BSH3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 AC087393.1-201ENST00000582896 145 ntBASIC19.41■□□□□ 0.7
NICN1Q9BSH3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NICN1Q9BSH3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms