Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CMSS1Q9BQ75 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CMSS1Q9BQ75 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CMSS1Q9BQ75 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.33■□□□□ 0.69
CMSS1Q9BQ75 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CMSS1Q9BQ75 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CMSS1Q9BQ75 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 AL592295.1-201ENST00000400984 884 ntBASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMSS1Q9BQ75 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 AL161729.1-201ENST00000604104 1402 ntBASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 PKD1P6-201ENST00000343738 4769 ntBASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CMSS1Q9BQ75 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 ANOS2P-203ENST00000472227 1816 ntBASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CMSS1Q9BQ75 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CMSS1Q9BQ75 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 AL592293.1-201ENST00000502889 1188 ntBASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.28■□□□□ 0.68
CMSS1Q9BQ75 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 RNF126P1-201ENST00000567452 1320 ntBASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CMSS1Q9BQ75 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CMSS1Q9BQ75 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CMSS1Q9BQ75 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CMSS1Q9BQ75 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms