Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC7Q96M83 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC7Q96M83 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC7Q96M83 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC7Q96M83 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.93■■■□□ 2.7
CCDC7Q96M83 AL117332.1-201ENST00000622628 974 ntBASIC31.93■■■□□ 2.7
CCDC7Q96M83 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC7Q96M83 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.92■■■□□ 2.7
CCDC7Q96M83 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC7Q96M83 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC7Q96M83 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC7Q96M83 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC7Q96M83 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC7Q96M83 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC7Q96M83 AC004448.1-201ENST00000458332 883 ntBASIC31.91■■■□□ 2.7
CCDC7Q96M83 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
CCDC7Q96M83 SNX5-217ENST00000606557 1087 ntBASIC31.91■■■□□ 2.7
CCDC7Q96M83 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC7Q96M83 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC7Q96M83 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC7Q96M83 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.9■■■□□ 2.7
CCDC7Q96M83 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC7Q96M83 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
CCDC7Q96M83 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
CCDC7Q96M83 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC7Q96M83 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC7Q96M83 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC7Q96M83 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC7Q96M83 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
CCDC7Q96M83 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
CCDC7Q96M83 AL136116.3-201ENST00000402907 1138 ntBASIC31.89■■■□□ 2.7
CCDC7Q96M83 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC7Q96M83 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.89■■■□□ 2.7
CCDC7Q96M83 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CCDC7Q96M83 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC7Q96M83 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC7Q96M83 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.88■■■□□ 2.69
CCDC7Q96M83 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC7Q96M83 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC7Q96M83 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC7Q96M83 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC7Q96M83 MIR3621-201ENST00000580529 85 ntBASIC31.87■■■□□ 2.69
CCDC7Q96M83 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.87■■■□□ 2.69
CCDC7Q96M83 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
CCDC7Q96M83 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC7Q96M83 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC7Q96M83 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC7Q96M83 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC7Q96M83 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC7Q96M83 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
CCDC7Q96M83 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC7Q96M83 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC7Q96M83 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.86■■■□□ 2.69
CCDC7Q96M83 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.86■■■□□ 2.69
CCDC7Q96M83 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC7Q96M83 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC7Q96M83 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.85■■■□□ 2.69
CCDC7Q96M83 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
CCDC7Q96M83 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC7Q96M83 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC7Q96M83 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC7Q96M83 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC7Q96M83 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC7Q96M83 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC7Q96M83 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC7Q96M83 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
CCDC7Q96M83 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CCDC7Q96M83 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC7Q96M83 MIR6724-1-201ENST00000616420 92 ntBASIC31.84■■■□□ 2.69
CCDC7Q96M83 MIR6724-2-201ENST00000616483 92 ntBASIC31.84■■■□□ 2.69
CCDC7Q96M83 MIR6724-4-201ENST00000617390 92 ntBASIC31.84■■■□□ 2.69
CCDC7Q96M83 AC110285.6-201ENST00000617652 491 ntBASIC31.84■■■□□ 2.69
CCDC7Q96M83 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
CCDC7Q96M83 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC7Q96M83 MIR6724-3-201ENST00000622482 92 ntBASIC31.84■■■□□ 2.69
CCDC7Q96M83 ALDH1A3-203ENST00000557963 1670 ntBASIC31.84■■■□□ 2.69
CCDC7Q96M83 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC7Q96M83 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC7Q96M83 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC7Q96M83 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC7Q96M83 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC7Q96M83 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC7Q96M83 AC010997.5-201ENST00000609182 354 ntBASIC31.83■■■□□ 2.69
CCDC7Q96M83 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms