Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EAF1Q96JC9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.48■□□□□ 0.55
EAF1Q96JC9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
EAF1Q96JC9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.47■□□□□ 0.55
EAF1Q96JC9 AC239859.2-201ENST00000444165 318 ntBASIC18.47■□□□□ 0.55
EAF1Q96JC9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.47■□□□□ 0.55
EAF1Q96JC9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EAF1Q96JC9 AL161729.1-201ENST00000604104 1402 ntBASIC18.47■□□□□ 0.55
EAF1Q96JC9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
EAF1Q96JC9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.47■□□□□ 0.55
EAF1Q96JC9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
EAF1Q96JC9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EAF1Q96JC9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EAF1Q96JC9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EAF1Q96JC9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
EAF1Q96JC9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.46■□□□□ 0.55
EAF1Q96JC9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.46■□□□□ 0.55
EAF1Q96JC9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.46■□□□□ 0.55
EAF1Q96JC9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
EAF1Q96JC9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EAF1Q96JC9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
EAF1Q96JC9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
EAF1Q96JC9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
EAF1Q96JC9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
EAF1Q96JC9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EAF1Q96JC9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EAF1Q96JC9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.45■□□□□ 0.54
EAF1Q96JC9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EAF1Q96JC9 AC079834.2-201ENST00000609776 1949 ntBASIC18.45■□□□□ 0.54
EAF1Q96JC9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
EAF1Q96JC9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EAF1Q96JC9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EAF1Q96JC9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EAF1Q96JC9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.44■□□□□ 0.54
EAF1Q96JC9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.44■□□□□ 0.54
EAF1Q96JC9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.44■□□□□ 0.54
EAF1Q96JC9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EAF1Q96JC9 MIR4787-201ENST00000607364 84 ntBASIC18.44■□□□□ 0.54
EAF1Q96JC9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EAF1Q96JC9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.43■□□□□ 0.54
EAF1Q96JC9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EAF1Q96JC9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.42■□□□□ 0.54
EAF1Q96JC9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EAF1Q96JC9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
EAF1Q96JC9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EAF1Q96JC9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.42■□□□□ 0.54
EAF1Q96JC9 AC004448.1-201ENST00000458332 883 ntBASIC18.42■□□□□ 0.54
EAF1Q96JC9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.42■□□□□ 0.54
EAF1Q96JC9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EAF1Q96JC9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.42■□□□□ 0.54
EAF1Q96JC9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
EAF1Q96JC9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EAF1Q96JC9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EAF1Q96JC9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
EAF1Q96JC9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EAF1Q96JC9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
EAF1Q96JC9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EAF1Q96JC9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
EAF1Q96JC9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.41■□□□□ 0.54
EAF1Q96JC9 AC092028.1-203ENST00000608262 953 ntBASIC18.41■□□□□ 0.54
EAF1Q96JC9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EAF1Q96JC9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EAF1Q96JC9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EAF1Q96JC9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EAF1Q96JC9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
EAF1Q96JC9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.4■□□□□ 0.54
EAF1Q96JC9 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.4■□□□□ 0.54
EAF1Q96JC9 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.4■□□□□ 0.54
EAF1Q96JC9 SNX5-217ENST00000606557 1087 ntBASIC18.4■□□□□ 0.54
EAF1Q96JC9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.4■□□□□ 0.54
EAF1Q96JC9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
EAF1Q96JC9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EAF1Q96JC9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EAF1Q96JC9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
EAF1Q96JC9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EAF1Q96JC9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.4■□□□□ 0.54
EAF1Q96JC9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EAF1Q96JC9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
EAF1Q96JC9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms