Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF31Q96EP0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF31Q96EP0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF31Q96EP0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF31Q96EP0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.87■■□□□ 1.09
RNF31Q96EP0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF31Q96EP0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF31Q96EP0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.86■■□□□ 1.09
RNF31Q96EP0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF31Q96EP0 AL136162.1-201ENST00000607711 1078 ntBASIC21.86■■□□□ 1.09
RNF31Q96EP0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF31Q96EP0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF31Q96EP0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF31Q96EP0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF31Q96EP0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF31Q96EP0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF31Q96EP0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF31Q96EP0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF31Q96EP0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF31Q96EP0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF31Q96EP0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF31Q96EP0 SRD5A1P1-201ENST00000442297 786 ntBASIC21.84■■□□□ 1.09
RNF31Q96EP0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.84■■□□□ 1.09
RNF31Q96EP0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF31Q96EP0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF31Q96EP0 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF31Q96EP0 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF31Q96EP0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
RNF31Q96EP0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF31Q96EP0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF31Q96EP0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF31Q96EP0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF31Q96EP0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF31Q96EP0 ZNRF2P3-201ENST00000424200 374 ntBASIC21.83■■□□□ 1.09
RNF31Q96EP0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF31Q96EP0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF31Q96EP0 AC024257.2-201ENST00000549699 147 ntBASIC21.83■■□□□ 1.09
RNF31Q96EP0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF31Q96EP0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF31Q96EP0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF31Q96EP0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RNF31Q96EP0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF31Q96EP0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.82■■□□□ 1.08
RNF31Q96EP0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF31Q96EP0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF31Q96EP0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF31Q96EP0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF31Q96EP0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF31Q96EP0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF31Q96EP0 AC005703.6-201ENST00000623265 1329 ntBASIC21.81■■□□□ 1.08
RNF31Q96EP0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF31Q96EP0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.81■■□□□ 1.08
RNF31Q96EP0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF31Q96EP0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RNF31Q96EP0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF31Q96EP0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF31Q96EP0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF31Q96EP0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF31Q96EP0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 HLA-L-211ENST00000482052 1765 ntBASIC21.8■■□□□ 1.08
RNF31Q96EP0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF31Q96EP0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 AC142381.2-201ENST00000566120 298 ntBASIC21.8■■□□□ 1.08
RNF31Q96EP0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF31Q96EP0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RNF31Q96EP0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF31Q96EP0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF31Q96EP0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF31Q96EP0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF31Q96EP0 AC106739.1-201ENST00000617035 715 ntBASIC21.79■■□□□ 1.08
RNF31Q96EP0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF31Q96EP0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF31Q96EP0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF31Q96EP0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF31Q96EP0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF31Q96EP0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF31Q96EP0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF31Q96EP0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.78■■□□□ 1.08
RNF31Q96EP0 AC135279.3-201ENST00000610945 1311 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms